Pavir.Ca02565 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ca02565 T072347_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRMZM2G479885
M10040_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OCSBF1_01
0.883 0.953
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca02565.1.p bZIP 23 86

Links

Other bZIP family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si023541m.g Setaria italica Si023541m.g I 0.891
Pavir.Cb00560 Panicum virgatum Pavir.Cb00560 I 0.891
GRMZM2G160902 Zea mays GRMZM2G160902 I 0.889
GRMZM2G479885 Zea mays GRMZM2G479885 D 0.883
Sb08g018170 Sorghum bicolor Sb08g018170 I 0.877
LPERR12G12950 Leersia perrieri LPERR12G12950 I 0.868
ORGLA11G0215100 Oryza glaberrima ORGLA11G0215100 I 0.867
ORGLA12G0138000 Oryza glaberrima ORGLA12G0138000 I 0.867
ORUFI12G17520 Oryza rufipogon ORUFI12G17520 I 0.867
ONIVA12G14510 Oryza nivara ONIVA12G14510 I 0.867
OMERI02G09390 Oryza meridionalis OMERI02G09390 I 0.867
BGIOSGA037592 Oryza indica BGIOSGA037592 I 0.867
OGLUM12G17310 Oryza glumaepatula OGLUM12G17310 I 0.867
OBART12G15770 Oryza barthii OBART12G15770 I 0.867
OPUNC12G14150 Oryza punctata OPUNC12G14150 I 0.866
BRADI4G04720 Brachypodium distachyon BRADI4G04720 I 0.860
Traes_5DS_011851EE7 Triticum aestivum Traes_5DS_011851EE7 I 0.845
Traes_5BS_FF44610EF1 Triticum aestivum Traes_5BS_FF44610EF1 I 0.845
MLOC_51930 Hordeum vulgare MLOC_51930 I 0.845
F775_30589 Aegilops tauschii F775_30589 I 0.845
GSMUA_Achr11G25310_001 Musa acuminata GSMUA_Achr11G25310_001 N 0.785