BCL11B (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000012711 T111485_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.827 1.000
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.827 1.000
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000013082 C2H2 ZF 428 449
ENSTGUP00000013082 C2H2 ZF 455 477
ENSTGUP00000013082 C2H2 ZF 765 787
ENSTGUP00000013082 C2H2 ZF 793 815
ENSTGUP00000013082 C2H2 ZF 823 846

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPLIN_001553300 Globodera pallida GPLIN_001553300 N
LOAG_16319 Loa loa LOAG_16319 I
maker-nMf.1.1.scaf04793-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf04793-snap-gene-0.5 N
MhA1_Contig3342.frz3.fgene1 Meloidogyne hapla MhA1_Contig3342.frz3.fgene1 I
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I