GA17994 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0078003 T114723_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.823 0.983
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.823 0.983
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.823 0.983
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.823 0.983
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.769 0.835
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0287794 C2H2 ZF 357 379
FBpp0287794 C2H2 ZF 392 414
FBpp0287794 C2H2 ZF 418 440
FBpp0287794 C2H2 ZF 446 468
FBpp0287794 C2H2 ZF 474 498

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP13085 Atta cephalotes ACEP13085 I 0.765
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.786
CapteG76255 Capitella teleta CapteG76255 I 0.755
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.783
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.764
CLEC007039 Cimex lectularius CLEC007039 I 0.779
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.756
ENSGMOG00000002669 Gadus morhua ENSGMOG00000002669 I 0.756
ENSLOCG00000005992 Lepisosteus oculatus ENSLOCG00000005992 I 0.756
ENSONIG00000009542 Oreochromis niloticus ENSONIG00000009542 I 0.756
snai2 Oryzias latipes ENSORLG00000017475 I 0.756
ENSPFOG00000014336 Poecilia formosa ENSPFOG00000014336 I 0.756
snai2 Tetraodon nigroviridis ENSTNIG00000008504 I 0.756
snai2 Takifugu rubripes ENSTRUG00000006860 I 0.756
ENSXMAG00000019030 Xiphophorus maculatus ENSXMAG00000019030 I 0.756
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.759
esg Drosophila melanogaster FBgn0001981 D 0.769
wor Drosophila melanogaster FBgn0001983 D 0.823
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.769
GF14525 Drosophila ananassae FBgn0091552 I 0.823
GF15382 Drosophila ananassae FBgn0092407 I 0.769
GG24207 Drosophila erecta FBgn0116339 I 0.823
GG25158 Drosophila erecta FBgn0117283 I 0.769
GH13119 Drosophila grimshawi FBgn0120596 I 0.819
GH13754 Drosophila grimshawi FBgn0121230 I 0.769
GI17894 Drosophila mojavensis FBgn0140635 I 0.769
GI22651 Drosophila mojavensis FBgn0145379 I 0.819
GL26425 Drosophila persimilis FBgn0164007 I 0.769
GL26594 Drosophila persimilis FBgn0164176 I 0.827
GM14357 Drosophila sechellia FBgn0169282 I 0.823
GD21956 Drosophila simulans FBgn0193371 I 0.823
GD24004 Drosophila simulans FBgn0195364 I 0.759
GJ17399 Drosophila virilis FBgn0204571 I 0.769
GJ23203 Drosophila virilis FBgn0210305 I 0.819
GK18133 Drosophila willistoni FBgn0220132 I 0.769
GK18253 Drosophila willistoni FBgn0220252 I 0.823
GE19402 Drosophila yakuba FBgn0236745 I 0.823
GE20968 Drosophila yakuba FBgn0238253 I 0.769
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.781
HMEL002306 Heliconius melpomene HMEL002306 I 0.786
KGM_17970 Danaus plexippus KGM_17970 I 0.786
L798_10614 Zootermopsis nevadensis L798_10614 I 0.793
LCUP006862 Lucilia cuprina LCUP006862 I 0.784
LCUP013268 Lucilia cuprina LCUP013268 I 0.771
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.777
LotgiG114290 Lottia gigantea LotgiG114290 I 0.765
MCINX001355 Melitaea cinxia MCINX001355 I 0.786
MDOA006149 Musca domestica MDOA006149 I 0.784
MDOA014024 Musca domestica MDOA014024 I 0.771
NV17743 Nasonia vitripennis NV17743 I 0.782
PHUM091060 Pediculus humanus PHUM091060 I 0.791
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.772
RPRC005707 Rhodnius prolixus RPRC005707 I 0.779
SINV14155 Solenopsis invicta SINV14155 I 0.767
SMAR001314 Strigamia maritima SMAR001314 I 0.757
SMAR001730 Strigamia maritima SMAR001730 I 0.759
TC014474 Tribolium castaneum TC014474 I 0.779
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.767