CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH17975
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0125443
T115369_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG4360
M03701_2.00
Drosophila melanogaster
ATTACAACAACAACH
DGTTGTTGTTGTAAT
SELEX
Nitta et al.(2015)
CG4360_1
0.826
0.976
CG4360
M06156_2.00
Drosophila melanogaster
MCAACAACAAVMS
SKBTTGTTGTTGK
B1H
Zhu et al.(2011)
CG4360_F1-3_SANGER_2.5_FBgn0038787
0.826
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0151881
C2H2 ZF
128
150
KQCHVCKNKFRQLTTLRNHMKIH
FBpp0151881
C2H2 ZF
156
178
YKCKHCDKAFRQISTLTNHVKIH
FBpp0151881
C2H2 ZF
184
206
FTCNICAKDFRQQSTLINHIKTH
FBpp0151881
C2H2 ZF
276
298
YQCSVCKRRFPQLSTLHNHERTH
FBpp0151881
C2H2 ZF
304
326
YKCETCDKSFSQLATLANHKKIH
FBpp0151881
C2H2 ZF
332
354
YTCSYCHMQFRQQSTLTNHMKTH
FBpp0151881
C2H2 ZF
473
495
FGCSVCRRFFSQQSTLVNHIKTH
FBpp0151881
C2H2 ZF
501
523
YKCKICEVSFRQVATLNNHMKIH
FBpp0151881
C2H2 ZF
529
551
YNCSYCPKQFRQKSTLQNHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN7_5277
Wickerhamomyces ciferrii
BN7_5277
N
CIMG_00643
Coccidioides immitis
CIMG_00643
N
CPC735_056160
Coccidioides posadasii
CPC735_056160
N
CTRG_03356
Candida tropicalis
CTRG_03356
N
DRE_00816
Drechslerella stenobrocha
DRE_00816
N
estExt_fgeneshPB_pg.C_200193
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_200193
N
G210_5573
Candida maltosa
G210_5573
N
GSTUM_00011353001
Tuber melanosporum
GSTUM_00011353001
N
H072_372
Dactylellina haptotyla
H072_372
N
PAS_chr1-4_0395
Komagataella pastoris
PAS_chr1-4_0395
N
UREG_00647
Uncinocarpus reesii
UREG_00647
N
XP_002490521.1
Pichia pastoris
XP_002490521.1
N
YALI0_E05555g
Yarrowia lipolytica
YALI0_E05555g
N