CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH17975
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0125443
T115369_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG4360
M03701_2.00
Drosophila melanogaster
ATTACAACAACAACH
DGTTGTTGTTGTAAT
SELEX
Nitta et al.(2015)
CG4360_1
0.826
0.976
CG4360
M06156_2.00
Drosophila melanogaster
MCAACAACAAVMS
SKBTTGTTGTTGK
B1H
Zhu et al.(2011)
CG4360_F1-3_SANGER_2.5_FBgn0038787
0.826
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0151881
C2H2 ZF
128
150
KQCHVCKNKFRQLTTLRNHMKIH
FBpp0151881
C2H2 ZF
156
178
YKCKHCDKAFRQISTLTNHVKIH
FBpp0151881
C2H2 ZF
184
206
FTCNICAKDFRQQSTLINHIKTH
FBpp0151881
C2H2 ZF
276
298
YQCSVCKRRFPQLSTLHNHERTH
FBpp0151881
C2H2 ZF
304
326
YKCETCDKSFSQLATLANHKKIH
FBpp0151881
C2H2 ZF
332
354
YTCSYCHMQFRQQSTLTNHMKTH
FBpp0151881
C2H2 ZF
473
495
FGCSVCRRFFSQQSTLVNHIKTH
FBpp0151881
C2H2 ZF
501
523
YKCKICEVSFRQVATLNNHMKIH
FBpp0151881
C2H2 ZF
529
551
YNCSYCPKQFRQKSTLQNHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA18132
Drosophila pseudoobscura
FBgn0078140
I
0.827
GF23213
Drosophila ananassae
FBgn0100207
I
0.827
GI10549
Drosophila mojavensis
FBgn0133313
I
0.827
GL24097
Drosophila persimilis
FBgn0161687
I
0.827
GM23199
Drosophila sechellia
FBgn0178066
I
0.827
GD20072
Drosophila simulans
FBgn0191553
I
0.827
GJ22905
Drosophila virilis
FBgn0210008
I
0.827
GE25080
Drosophila yakuba
FBgn0242168
I
0.827
CG4360
Drosophila melanogaster
FBgn0038787
D
0.826
GG15533
Drosophila erecta
FBgn0107781
I
0.826
GK22737
Drosophila willistoni
FBgn0224714
I
0.816