GH23039 (Drosophila grimshawi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0130496 T115456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.827 1.000
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.827 1.000
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.827 1.000
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.827 1.000
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.827 1.000
ref-2
M00621_2.00 		Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG		 PBM
Narasimhan et al.(2015)
pTH9089 		0.757 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0156945 C2H2 ZF 304 331
FBpp0156945 C2H2 ZF 337 361
FBpp0156945 C2H2 ZF 367 391
FBpp0156945 C2H2 ZF 397 421

Links

Other C2H2 ZF family TFs
Other Drosophila grimshawi TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10015684 Chelonia mydas Cmyd_10015684 N
ENSAMEG00000018899 Ailuropoda melanoleuca ENSAMEG00000018899 N
ZBED2 Bos taurus ENSBTAG00000046637 N
ZBED2 Canis familiaris ENSCAFG00000030690 N
ENSCHOG00000003372 Choloepus hoffmanni ENSCHOG00000003372 N
ZBED2 Choloepus hoffmanni ENSCHOG00000009685 N
ZBED3 Callithrix jacchus ENSCJAG00000019950 N
ZBED2 Callithrix jacchus ENSCJAG00000020209 N
ENSCSAG00000018719 Chlorocebus sabaeus ENSCSAG00000018719 N
ENSCSAG00000019417 Chlorocebus sabaeus ENSCSAG00000019417 N
ZBED2 Dasypus novemcinctus ENSDNOG00000013027 N
ZBED3 Dasypus novemcinctus ENSDNOG00000041041 N
ZBED2 Equus caballus ENSECAG00000001371 N
ZBED3 Homo sapiens ENSG00000132846 N
ZBED2 Homo sapiens ENSG00000177494 N
ZBED3 Gorilla gorilla ENSGGOG00000002896 N
ZBED3 Loxodonta africana ENSLAFG00000001192 N
ENSMEUG00000007529 Macropus eugenii ENSMEUG00000007529 N
ZBED2 Myotis lucifugus ENSMLUG00000024352 N
ZBED3 Macaca mulatta ENSMMUG00000021357 N
ENSMMUG00000032061 Macaca mulatta ENSMMUG00000032061 N
ZBED2 Monodelphis domestica ENSMODG00000025309 N
ENSMPUG00000018931 Mustela putorius furo ENSMPUG00000018931 N
ENSNLEG00000004079 Nomascus leucogenys ENSNLEG00000004079 N
ENSNLEG00000012648 Nomascus leucogenys ENSNLEG00000012648 N
ENSOANG00000015761 Ornithorhynchus anatinus ENSOANG00000015761 N
ENSOARG00000001810 Ovis aries ENSOARG00000001810 N
ZBED2 Oryctolagus cuniculus ENSOCUG00000029023 N
ZBED3 Otolemur garnettii ENSOGAG00000033172 N
ZBED2 Otolemur garnettii ENSOGAG00000034292 N
ENSP00000321370 Macaca fascicularis ENSP00000321370 N
ENSP00000321370-D1 Bos grunniens ENSP00000321370-D1 N
ENSPANG00000001756 Papio anubis ENSPANG00000001756 N
ENSPANG00000009749 Papio anubis ENSPANG00000009749 N
ENSPCAG00000010917 Procavia capensis ENSPCAG00000010917 N
ENSPPYG00000013560 Pongo abelii ENSPPYG00000013560 N
ZBED2 Pan troglodytes ENSPTRG00000015206 N
ZBED2 Pteropus vampyrus ENSPVAG00000002199 N
ZBED2 Sorex araneus ENSSARG00000010422 N
ZBED2 Sus scrofa ENSSSCG00000011936 N
ZBED3 Sus scrofa ENSSSCG00000014095 N
ENSSTOG00000003989 Ictidomys tridecemlineatus ENSSTOG00000003989 N
ENSTSYG00000000791 Tarsius syrichta ENSTSYG00000000791 N
ZBED2 Vicugna pacos ENSVPAG00000000425 N
Myotis_brandtii_ZBED2_10003001 Myotis brandtii Myotis_brandtii_ZBED2_10003001 N