CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GNLVRS01_PISO0F07089g
(
Millerozyma farinosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GNLVRS01_PISO0F07089g
T118511_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CaO19.4752
M01035_2.00
Candida albicans
VCCCCYDNNN
NNNHRGGGGB
PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb
0.798
0.913
KLLA0_F26961g
M01039_2.00
Kluyveromyces lactis
CYCCYTD
HARGGRG
PBM
Siggers et al.(2014)
KLLA0F29691gKlac
0.761
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE88692
C2H2 ZF
590
613
FPCPECSKQFKRSEHLKRHIRSVH
CCE88692
C2H2 ZF
619
641
FHCKYCEKKFSRSDNLAQHLKTH
Links
Other
C2H2 ZF
family TFs
Other
Millerozyma farinosa
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN7_2125
Wickerhamomyces ciferrii
BN7_2125
I
0.758
CANTEDRAFT_134781
Candida tenuis
CANTEDRAFT_134781
I
0.827
CaO19.12215
Candida albicans
CaO19.12215
I
0.798
CaO19.4752
Candida albicans
CaO19.4752
D
0.798
CD36_08440
Candida dubliniensis
CD36_08440
I
0.774
CLUG_01356
Clavispora lusitaniae
CLUG_01356
I
0.827
CLUG_01356
Candida lusitaniae
CLUG_01356
I
0.827
CORT_0A05380
Candida orthopsilosis
CORT_0A05380
I
0.786
CPAG_03960
Candida parapsilosis
CPAG_03960
N
0.767
CTRG_03253
Candida tropicalis
CTRG_03253
I
0.798
DEHA2A08382g
Debaryomyces hansenii
DEHA2A08382g
I
0.821
fgenesh1_pg.C_chr_7.1000062
Pichia stipitis
fgenesh1_pg.C_chr_7.1000062
I
0.798
G210_5389
Candida maltosa
G210_5389
I
0.798
GNLVRS01_PISO0E05768g
Millerozyma farinosa
GNLVRS01_PISO0E05768g
I
0.822
KLLA0_F26961g
Kluyveromyces lactis
KLLA0_F26961g
D
0.761
KLTH0D08734g
Lachancea thermotolerans
KLTH0D08734g
I
0.773
KLTH0D08734g
Kluyveromyces thermotolerans
KLTH0D08734g
I
0.773
Kwal_8351
Kluyveromyces waltii
Kwal_8351
I
0.773
LALA0_S09e05358g
Lachancea lanzarotensis
LALA0_S09e05358g
I
0.773
LELG_00530
Lodderomyces elongisporus
LELG_00530
I
0.762
NCAS_0A12910
Naumovozyma castellii
NCAS_0A12910
I
0.757
PGUG_01635
Meyerozyma guilliermondii
PGUG_01635
I
0.821
PGUG_01635
Candida guilliermondii
PGUG_01635
I
0.821
PICST_33273
Scheffersomyces stipitis
PICST_33273
I
0.798
SAKL0B11330g
Lachancea kluyveri
SAKL0B11330g
I
0.773
Scas_Contig709.32
Saccharomyces castellii
Scas_Contig709.32
I
0.757
TPHA_0C02580
Tetrapisispora phaffii
TPHA_0C02580
I
0.761