fgenesh1_pg.C_chr_7.1000062 (Pichia stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh1_pg.C_chr_7.1000062 T138975_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CaO19.4752
M01035_2.00 		Candida albicans
VCCCCYDNNN
NNNHRGGGGB		 PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb 		0.774 0.913
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_chr_7.1000062 C2H2 ZF 768 791
fgenesh1_pg.C_chr_7.1000062 C2H2 ZF 797 819

Links

Other C2H2 ZF family TFs
Other Pichia stipitis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PICST_33273 Scheffersomyces stipitis PICST_33273 I 0.827
GNLVRS01_PISO0E05768g Millerozyma farinosa GNLVRS01_PISO0E05768g I 0.803
CLUG_01356 Candida lusitaniae CLUG_01356 I 0.798
CANTEDRAFT_134781 Candida tenuis CANTEDRAFT_134781 I 0.798
CD36_08440 Candida dubliniensis CD36_08440 I 0.798
CLUG_01356 Clavispora lusitaniae CLUG_01356 I 0.798
GNLVRS01_PISO0F07089g Millerozyma farinosa GNLVRS01_PISO0F07089g I 0.798
PGUG_01635 Candida guilliermondii PGUG_01635 I 0.792
DEHA2A08382g Debaryomyces hansenii DEHA2A08382g I 0.792
PGUG_01635 Meyerozyma guilliermondii PGUG_01635 I 0.792
CPAG_03960 Candida parapsilosis CPAG_03960 N 0.786
CaO19.12215 Candida albicans CaO19.12215 I 0.774
CaO19.4752 Candida albicans CaO19.4752 D 0.774
CTRG_03253 Candida tropicalis CTRG_03253 I 0.774
G210_5389 Candida maltosa G210_5389 I 0.774
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.773
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.773
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.773
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.773
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.773
CORT_0A05380 Candida orthopsilosis CORT_0A05380 I 0.762
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.761
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.761
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.758
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.757
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.757
PAS_chr2-1_0723 Komagataella pastoris PAS_chr2-1_0723 I 0.755
XP_002491652.1 Pichia pastoris XP_002491652.1 I 0.755