GSMUA_Achr11G07460_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr11G07460_001 T118658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.802 0.930
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.802 0.930
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.774 0.930
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.774 0.930
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.774 0.884
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.774 0.884
IDD4
M06809_2.00 		Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW		 Dap-seq
OMalley et al.(2016)
IDD4_col_a 		0.769 0.860
IDD7
M06803_2.00 		Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN		 Dap-seq
OMalley et al.(2016)
IDD7_col_a 		0.769 0.860
MGP
M06795_2.00 		Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND		 Dap-seq
OMalley et al.(2016)
MGP_col_a 		0.769 0.860
MGP
M06796_2.00 		Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN		 Dap-seq
OMalley et al.(2016)
MGP_colamp_a 		0.769 0.860
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P07460_001 C2H2 ZF 188 209
GSMUA_Achr11P07460_001 C2H2 ZF 208 234

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

529 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG005558.1 Alligator sinensis Alligator_sinensis_CCG005558.1 I
ZNF282 Bos taurus ENSBTAG00000020448 I
ENSCSAG00000007010 Chlorocebus sabaeus ENSCSAG00000007010 I
ZNF282 Dasypus novemcinctus ENSDNOG00000008361 I
ZNF282 Homo sapiens ENSG00000170265 D
ZNF398 Gorilla gorilla ENSGGOG00000005812 I
ENSMICG00000016620 Microcebus murinus ENSMICG00000016620 I
ZNF282 Myotis lucifugus ENSMLUG00000010622 I
ZNF282 Macaca mulatta ENSMMUG00000000767 I
ZNF282 Monodelphis domestica ENSMODG00000001987 I
ENSMPUG00000006666 Mustela putorius furo ENSMPUG00000006666 I
Zfp282 Mus musculus ENSMUSG00000025821 I
ZNF282 Oryctolagus cuniculus ENSOCUG00000008423 I
ZNF282 Ochotona princeps ENSOPRG00000010540 I
ENSPANG00000008719 Papio anubis ENSPANG00000008719 I
ENSPPYG00000018151 Pongo abelii ENSPPYG00000018151 I
ZNF282 Pan troglodytes ENSPTRG00000019841 I
Zfp282 Rattus norvegicus ENSRNOG00000026981 I
ENSSHAG00000018278 Sarcophilus harrisii ENSSHAG00000018278 I
ZNF282 Sus scrofa ENSSSCG00000016773 I
ENSSTOG00000021295 Ictidomys tridecemlineatus ENSSTOG00000021295 I
ZNF282 Tupaia belangeri ENSTBEG00000000091 I
ZNF282 Tursiops truncatus ENSTTRG00000015685 I
Myotis_brandtii_ZNF282_10025638 Myotis brandtii Myotis_brandtii_ZNF282_10025638 I