GSTUM_00009963001 (Tuber melanosporum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSTUM_00009963001 T118826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
msn-1
M01192_2.00 		Neurospora crassa
VCCCCTDW
WHAGGGGB		 PBM
Lambert et al.(2019)
pTH8923 		0.768 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAZ85235 C2H2 ZF 203 226
CAZ85235 C2H2 ZF 232 254

Links

Other C2H2 ZF family TFs
Other Tuber melanosporum TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008185 Oryza indica BGIOSGA008185 N 0.000
BRADI3G43310 Brachypodium distachyon BRADI3G43310 N 0.000
GRMZM2G024976 Zea mays GRMZM2G024976 N 0.000
GSMUA_Achr8G28470_001 Musa acuminata GSMUA_Achr8G28470_001 I 0.000
LPERR02G13140 Leersia perrieri LPERR02G13140 I 0.000
MLOC_42821 Hordeum vulgare MLOC_42821 I 0.000
OB0121G10030 Oryza brachyantha OB0121G10030 N 0.000
OBART02G16380 Oryza barthii OBART02G16380 N 0.000
OGLUM02G16420 Oryza glumaepatula OGLUM02G16420 N 0.000
OLONG_013998 Oryza longistaminata OLONG_013998 N 0.000
OMERI02G15910 Oryza meridionalis OMERI02G15910 N 0.000
ONIVA02G17640 Oryza nivara ONIVA02G17640 N 0.000
OPUNC02G14620 Oryza punctata OPUNC02G14620 N 0.000
ORUFI02G16870 Oryza rufipogon ORUFI02G16870 N 0.000
OS02G0469900 Oryza sativa OS02G0469900 N 0.000
Pavir.Aa02269 Panicum virgatum Pavir.Aa02269 N 0.000
Pavir.Ab01767 Panicum virgatum Pavir.Ab01767 N 0.000
Sb04g017850 Sorghum bicolor Sb04g017850 N 0.000
Si017168m.g Setaria italica Si017168m.g N 0.000
TRIUR3_18598 Triticum urartu TRIUR3_18598 N 0.000