CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG159035
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG159035
T121699_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP159035
C2H2 ZF
228
250
FQCDACQKSYSTFGGLSKHKQFH
LotgiP159035
C2H2 ZF
259
281
FRCKYCDKSYSSLGALKMHIRTH
LotgiP159035
C2H2 ZF
285
307
CKCKLCGKAFSRPWLLQGHIRTH
LotgiP159035
C2H2 ZF
313
335
FSCQHCGRAFADRSNLRAHLQTH
LotgiP159035
C2H2 ZF
341
362
YGCKNCSKTFSRMSLLVKHGES
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10011871
Crassostrea gigas
CGI_10011871
N
0.804
D917_07943
Trichinella nativa
D917_07943
N
0.757
D918_04200
Trichuris suis
D918_04200
N
0.760
EFV52511
Trichinella spiralis
EFV52511
N
0.757
Ocbimv22026881m.g
Octopus bimaculoides
Ocbimv22026881m.g
N
0.778
SPU_001113
Strongylocentrotus purpuratus
SPU_001113
N
0.775
TMUE_s0044003300
Trichuris muris
TMUE_s0044003300
N
0.760
TTRE_0000063401
Trichuris trichiura
TTRE_0000063401
N
0.756