CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D918_04200
(
Trichuris suis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D918_04200
T152941_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D918_04200
C2H2 ZF
232
254
LQCPDCSRSYSTLGGLSKHRQFH
D918_04200
C2H2 ZF
263
285
FGCKFCGKQYSTLGAMKMHIRTH
D918_04200
C2H2 ZF
289
311
CKCHLCGKAFSRPWLLQGHIRTH
D918_04200
C2H2 ZF
317
339
FCCGHCGRAFADRSNLRAHLQTH
D918_04200
C2H2 ZF
345
366
YSCKMCQKTFSRMSLLTKHVTS
Links
Other
C2H2 ZF
family TFs
Other
Trichuris suis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TMUE_s0044003300
Trichuris muris
TMUE_s0044003300
N
0.827
EFV52511
Trichinella spiralis
EFV52511
N
0.820
D917_07943
Trichinella nativa
D917_07943
N
0.820
TTRE_0000063401
Trichuris trichiura
TTRE_0000063401
N
0.819
LotgiG159035
Lottia gigantea
LotgiG159035
N
0.760
CGI_10011871
Crassostrea gigas
CGI_10011871
N
0.759
SPU_001113
Strongylocentrotus purpuratus
SPU_001113
N
0.758