CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG69875
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG69875
T121817_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.760
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP69875
C2H2 ZF
3
25
YQCDVCYKRFSRSNTLVTHKRIH
LotgiP69875
C2H2 ZF
31
53
FKCEVCDRAFRQPGNLTRHRLTH
LotgiP69875
C2H2 ZF
59
81
YVCTVCNKAFNRASNLQTHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSECAG00000021857
Equus caballus
ENSECAG00000021857
N
ENSMPUG00000005528
Mustela putorius furo
ENSMPUG00000005528
N
ZNF345
Sus scrofa
ENSSSCG00000023195
N