OBART03G22570 (Oryza barthii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OBART03G22570 T124631_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.762 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.762 0.783
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.762 0.739
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.762 0.739
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.762 0.739
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.758 0.783
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.758 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G22570.1 C2H2 ZF 73 95
OBART03G22570.1 C2H2 ZF 135 157

Links

Other C2H2 ZF family TFs
Other Oryza barthii TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009222 Calypte anna Aan_R009222 I 0.000
Aan_R012662 Calypte anna Aan_R012662 I 0.000
Aan_R015695 Calypte anna Aan_R015695 I 0.000
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.000
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.000
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.000
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.000
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.000
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.000
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.000
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.000
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.000
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.000
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.000
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.000
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.000
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.000
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.000
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.000
ENSAMXG00000012775 Astyanax mexicanus ENSAMXG00000012775 I 0.000
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.000
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.000
IRF4 Bos taurus ENSBTAG00000002929 I 0.000
IRF8 Bos taurus ENSBTAG00000017824 I 0.000
ENSCAFG00000007099 Canis familiaris ENSCAFG00000007099 I 0.000
IRF8 Canis familiaris ENSCAFG00000019919 I 0.000
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.000
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.000
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.000
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.000
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.000
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.000
irf4a Danio rerio ENSDARG00000006560 I 0.000
irf9 Danio rerio ENSDARG00000016457 I 0.000
irf10 Danio rerio ENSDARG00000027658 I 0.000
irf4b Danio rerio ENSDARG00000055374 I 0.000
irf8 Danio rerio ENSDARG00000056407 I 0.000
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.000
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.000
IRF4 Equus caballus ENSECAG00000016808 I 0.000
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.000
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.000
IRF4 Echinops telfairi ENSETEG00000018472 I 0.000
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.000
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.000
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.000
IRF8 Felis catus ENSFCAG00000007615 I 0.000
IRF4 Felis catus ENSFCAG00000022941 I 0.000
ENSFCAG00000029870 Felis catus ENSFCAG00000029870 I 0.000
IRF4 Homo sapiens ENSG00000137265 D 0.000
IRF8 Homo sapiens ENSG00000140968 D 0.000
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.000
irf10 Gasterosteus aculeatus ENSGACG00000015123 I 0.000
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.000
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.000
IRF8 Gallus gallus ENSGALG00000005757 I 0.000
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.000
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.000
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.000
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.000
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.000
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.000
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I 0.000
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.000
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.000
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.000
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.000
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.000
ENSLAFG00000030530 Loxodonta africana ENSLAFG00000030530 I 0.000
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.000
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.000
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.000
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.000
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.000
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.000
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.000
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.000
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.000
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.000
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.000
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.000
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.000
Irf4 Mus musculus ENSMUSG00000021356 D 0.000
Irf8 Mus musculus ENSMUSG00000041515 D 0.000
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.000
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.000
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.000
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I 0.000
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.000
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.000
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.000
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.000
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.000
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.000
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.000
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.000
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.000
ENSONIG00000017148 Oreochromis niloticus ENSONIG00000017148 I 0.000
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.000
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.000
irf4b Oryzias latipes ENSORLG00000012712 I 0.000
irf4a Oryzias latipes ENSORLG00000017242 I 0.000
irf8 Oryzias latipes ENSORLG00000018216 I 0.000
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.000
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.000
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.000
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.000
IRF8 Procavia capensis ENSPCAG00000004460 I 0.000
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.000
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.000
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.000
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.000
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.000
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.000
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.000
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.000
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.000
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.000
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.000
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.000
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.000
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.000
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.000
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.000
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.000
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.000
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.000
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.000
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.000
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.000
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.000
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.000
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.000
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.000
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.000
irf10 Tetraodon nigroviridis ENSTNIG00000012613 I 0.000
irf10 Takifugu rubripes ENSTRUG00000002917 I 0.000
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.000
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.000
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.000
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.000
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.000
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.000
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.000
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.000
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.000
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.000
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.000
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.000
Ogr08841 Ophisaurus gracilis Ogr08841 I 0.000
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.000
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.000
Tal_R007108 Tyto alba Tal_R007108 I 0.000
Tal_R010571 Tyto alba Tal_R010571 I 0.000
irf8.L Xenopus laevis XB-GENE-985949 I 0.000
irf4 Xenopus tropicalis XB-GENE-988321 I 0.000