ENSLOCG00000001013 (Lepisosteus oculatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSLOCG00000001013 T244149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.942 0.942
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.942 0.942
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.942 0.942
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.942 0.942
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.942 0.942
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.942 0.942
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.942 0.942
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.942 0.942
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.942 0.942
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.923 0.923
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.808 0.808
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.808 0.808
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.808 0.808
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.808 0.808
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.808 0.808
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.808 0.808
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.808 0.808
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.808 0.808
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.808 0.808
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.808 0.808
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.808 0.808
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.808 0.808
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000001144 IRF 10 114

Links

Other IRF family TFs
Other Lepisosteus oculatus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.952
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.952
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.942
IRF8 Homo sapiens ENSG00000140968 D 0.942
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.942
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.942
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.942
Aan_R009222 Calypte anna Aan_R009222 I 0.942
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.942
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.942
Tal_R007108 Tyto alba Tal_R007108 I 0.942
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.933
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.933
IRF8 Canis familiaris ENSCAFG00000019919 I 0.933
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.933
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.933
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.933
IRF8 Felis catus ENSFCAG00000007615 I 0.933
IRF8 Gallus gallus ENSGALG00000005757 I 0.933
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.933
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.933
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.933
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.933
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.933
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.933
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.933
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.933
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.933
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.933
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.933
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.933
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.933
IRF8 Bos taurus ENSBTAG00000017824 I 0.923
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.923
Irf8 Mus musculus ENSMUSG00000041515 D 0.923
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.923
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.923
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.923
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.923
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.923
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.923
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.923
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.913
IRF8 Procavia capensis ENSPCAG00000004460 I 0.913
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.913
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.904
irf8.L Xenopus laevis XB-GENE-985949 I 0.904
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.894
irf8 Danio rerio ENSDARG00000056407 I 0.894
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.894
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.894
Ogr08841 Ophisaurus gracilis Ogr08841 I 0.892
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.885
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.885
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.885
irf8 Oryzias latipes ENSORLG00000018216 I 0.885
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.885
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.885
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.875
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.875
ENSSSCG00000023184 Sus scrofa ENSSSCG00000023184 I 0.817
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.817
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.810
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.810
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.810
Irf4 Mus musculus ENSMUSG00000021356 D 0.808
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.808
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.800
IRF4 Bos taurus ENSBTAG00000002929 I 0.800
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.800
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.800
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.800
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.800
IRF4 Equus caballus ENSECAG00000016808 I 0.800
IRF4 Echinops telfairi ENSETEG00000018472 I 0.800
IRF4 Felis catus ENSFCAG00000022941 I 0.800
IRF4 Homo sapiens ENSG00000137265 D 0.800
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.800
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.800
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.800
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.800
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.800
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.800
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.800
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.800
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.800
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.800
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.800
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.800
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.800
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.800
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.800
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.800
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.800
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.800
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.798
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.798
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.798
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.797
Tal_R010571 Tyto alba Tal_R010571 I 0.793
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.790
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.790
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.790
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.790
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.790
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.790
Aan_R012662 Calypte anna Aan_R012662 I 0.790
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.790
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.790
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.790
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.790
ENSPANG00000023389 Papio anubis ENSPANG00000023389 I 0.789
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.789
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I 0.781
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.781
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.781
irf4 Xenopus tropicalis XB-GENE-988321 I 0.781
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.779
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.779
Aan_R015695 Calypte anna Aan_R015695 I 0.772
Gfo_R005312 Geospiza fortis Gfo_R005312 I 0.772
irf4b Danio rerio ENSDARG00000055374 I 0.771
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.771
irf4b Oryzias latipes ENSORLG00000012712 I 0.769
irf4a Oryzias latipes ENSORLG00000017242 I 0.769
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.769
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.769
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.762
irf10 Danio rerio ENSDARG00000027658 I 0.762
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.762
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.762
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.760
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.760
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.760
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I 0.754
irf4a Danio rerio ENSDARG00000006560 I 0.752
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.752
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.752
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.752
ENSLOCG00000001187 Lepisosteus oculatus ENSLOCG00000001187 I 0.750
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.750
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.743
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.743
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.740
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.740
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.740
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.733
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.732
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.731
irf9 Danio rerio ENSDARG00000016457 I 0.721
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.714
ENSSHAG00000012864 Sarcophilus harrisii ENSSHAG00000012864 I 0.714
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.714
irf10 Tetraodon nigroviridis ENSTNIG00000012613 I 0.714
irf10 Takifugu rubripes ENSTRUG00000002917 I 0.712
ENSAPLG00000010348 Anas platyrhynchos ENSAPLG00000010348 I 0.711
Cmyd_10009547 Chelonia mydas Cmyd_10009547 I 0.707
ENSAMXG00000012775 Astyanax mexicanus ENSAMXG00000012775 I 0.705
Ogr04948 Ophisaurus gracilis Ogr04948 N 0.705
irf9 Gasterosteus aculeatus ENSGACG00000001697 I 0.702
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.702