ENSAMXG00000004911 (Astyanax mexicanus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSAMXG00000004911 T243929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.733 0.733
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.723 0.723
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.723 0.723
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.723 0.723
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.723 0.723
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.723 0.723
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.723 0.723
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.723 0.723
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.723 0.723
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.723 0.723
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.713 0.713
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.713 0.713
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.713 0.713
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.713 0.713
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.713 0.713
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.713 0.713
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.713 0.713
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.713 0.713
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.713 0.713
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.713 0.713
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.713 0.713
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.713 0.713
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000005036 IRF 11 112
ENSAMXP00000005037 IRF 11 112

Links

Other IRF family TFs
Other Astyanax mexicanus TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
irf9 Danio rerio ENSDARG00000016457 I 0.856
irf9 Takifugu rubripes ENSTRUG00000017722 I 0.812
irf9 Oryzias latipes ENSORLG00000013335 I 0.798
irf9 Gasterosteus aculeatus ENSGACG00000001697 I 0.788
ENSLOCG00000001187 Lepisosteus oculatus ENSLOCG00000001187 I 0.786
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I 0.782
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.779
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.769
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.762
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I 0.762
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I 0.760
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.743
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.740
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.733
IRF8 Bos taurus ENSBTAG00000017824 I 0.733
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.733
Irf8 Mus musculus ENSMUSG00000041515 D 0.733
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.733
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.733
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.733
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.723
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.723
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.723
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.723
IRF8 Homo sapiens ENSG00000140968 D 0.723
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.723
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.723
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.723
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.723
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.723
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.723
IRF9 Otolemur garnettii ENSOGAG00000026670 I 0.723
irf4b Oryzias latipes ENSORLG00000012712 I 0.723
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.723
IRF8 Procavia capensis ENSPCAG00000004460 I 0.723
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.723
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.723
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.723
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.723
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.721
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.713
irf8 Danio rerio ENSDARG00000056407 I 0.713
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.713
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.713
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.713
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.713
Irf4 Mus musculus ENSMUSG00000021356 D 0.713
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.713
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.713
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.713
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.713
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.713
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.713
Aan_R012662 Calypte anna Aan_R012662 I 0.713
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.713
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.713
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.713
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.713
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.713
irf8.L Xenopus laevis XB-GENE-985949 I 0.713
IRF8 Gallus gallus ENSGALG00000005757 I 0.712
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.712
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.712
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.712
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.712
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.712
Tal_R007108 Tyto alba Tal_R007108 I 0.712
irf4a Danio rerio ENSDARG00000006560 I 0.705
irf4b Danio rerio ENSDARG00000055374 I 0.705
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.705
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.705
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.705
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.705
ENSACAG00000003946 Anolis carolinensis ENSACAG00000003946 I 0.703
IRF9 Callithrix jacchus ENSCJAG00000007065 I 0.703
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.703
IRF9 Myotis lucifugus ENSMLUG00000025255 I 0.703
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I 0.703
irf9.L Xenopus laevis XB-GENE-992442 N 0.703
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.702
IRF8 Canis familiaris ENSCAFG00000019919 I 0.702
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.702
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.702
IRF8 Felis catus ENSFCAG00000007615 I 0.702
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.702
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.702
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.702
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.702
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.702
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.702
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.702
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.702
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.702