CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Physo127993
(
Phytophthora sojae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Physo127993
T126293_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo127993
C2H2 ZF
364
386
HECPTCNKQFRGRSELQNHIRTH
Physo127993
C2H2 ZF
392
416
LKCSYAGCTKRYAHSSNLRAHERTH
Physo127993
C2H2 ZF
422
446
YTCHYDGCGKSFAHSVSLKEHIWMH
Physo127993
C2H2 ZF
452
476
YVCPYEGCQKKFTQVSNFARHKKTH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora sojae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_027820
Albugo laibachii
ALNC14_027820
N
0.789
estExt_fgenesh1_kg.C_2620004
Phytophthora capsici
estExt_fgenesh1_kg.C_2620004
N
0.827
F443_04902
Phytophthora parasitica
F443_04902
N
0.827
fgenesh_scip_prom.28083.3966
Phytophthora lateralis
fgenesh_scip_prom.28083.3966
N
0.813
fgenesh_scip_prom.46568.5520
Phytophthora kernoviae
fgenesh_scip_prom.46568.5520
N
0.812
HpaG806957
Hyaloperonospora arabidopsidis
HpaG806957
N
0.827
maker-pag1_scaffold_198-snap-gene-0.19
Pythium aphanidermatum
maker-pag1_scaffold_198-snap-gene-0.19
N
0.810
maker-par_contig_1574-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1574-fgenesh-gene-0.1
N
0.815
maker-pir_contig_91-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_91-fgenesh-gene-0.1
N
0.798
maker-piw_contig_312-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_312-fgenesh-gene-0.2
N
0.798
maker-pve_contig_65-fgenesh-gene-0.18
Pythium vexans
maker-pve_contig_65-fgenesh-gene-0.18
N
0.815
Phyra78502
Phytophthora ramorum
Phyra78502
N
0.815
PITG_19177
Phytophthora infestans
PITG_19177
N
0.815
PYU1_G011596
Pythium ultimum
PYU1_G011596
N
0.801
SPRG_08759
Saprolegnia parasitica
SPRG_08759
N
0.767