CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV09_05506
(
Verruconis gallopava
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV09_05506
T127625_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
msn-1
M01192_2.00
Neurospora crassa
VCCCCTDW
WHAGGGGB
PBM
Lambert et al.(2019)
pTH8923
0.781
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW03293
C2H2 ZF
445
468
FVCNLCSRRFRRQEHLKRHYRSLH
KIW03293
C2H2 ZF
474
496
FECSDCGKKFSRSDNLSQHQRTH
KIW03294
C2H2 ZF
445
468
FVCNLCSRRFRRQEHLKRHYRSLH
KIW03294
C2H2 ZF
474
496
FECSDCGKKFSRSDNLSQHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Verruconis gallopava
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
20073_Multiple
Saccharomyces mikatae
20073_Multiple
I
0.000
20426_YOR032C
Saccharomyces paradoxus
20426_YOR032C
I
0.000
23114_YOR032C
Saccharomyces bayanus
23114_YOR032C
I
0.000
AACERI_AaceriAER385C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAER385C
I
0.000
AGOS_AER385C
Ashbya gossypii
AGOS_AER385C
I
0.000
CLUG_00757
Clavispora lusitaniae
CLUG_00757
N
0.000
CLUG_00757
Candida lusitaniae
CLUG_00757
N
0.000
Ecym_1333
Eremothecium cymbalariae
Ecym_1333
I
0.000
GNLVRS01_PISO0C07856g
Millerozyma farinosa
GNLVRS01_PISO0C07856g
N
0.000
GNLVRS01_PISO0D07923g
Millerozyma farinosa
GNLVRS01_PISO0D07923g
N
0.000
KLTH0E02376g
Lachancea thermotolerans
KLTH0E02376g
I
0.000
KLTH0E02376g
Kluyveromyces thermotolerans
KLTH0E02376g
I
0.000
KUCA_T00002265001
Kuraishia capsulata
KUCA_T00002265001
I
0.000
LALA0_S05e02850g
Lachancea lanzarotensis
LALA0_S05e02850g
I
0.000
SAKL0G07282g
Lachancea kluyveri
SAKL0G07282g
I
0.000
SU7_3203
Saccharomyces arboricola
SU7_3203
I
0.000
TDEL_0A04900
Torulaspora delbrueckii
TDEL_0A04900
I
0.000
HMS1
Saccharomyces cerevisiae
YOR032C
D
0.000
ZBAI_08029
Zygosaccharomyces bailii
ZBAI_08029
I
0.000
ZYRO0G15972g
Zygosaccharomyces rouxii
ZYRO0G15972g
I
0.000