SCHCODRAFT_256250 (Schizophyllum commune)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SCHCODRAFT_256250 T128381_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_256250
M01463_2.00		 Schizophyllum commune
BGCGRATC
GATYCGCV		 PBM
Najafabadi et al.(2015a)
pTH10245		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01463_2.00 C2H2 ZF 51 73
M01463_2.00 C2H2 ZF 79 100

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ00487 C2H2 ZF 276 298
EFJ00487 C2H2 ZF 304 325

Links

Other C2H2 ZF family TFs
Other Schizophyllum commune TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001527 Oryza indica BGIOSGA001527 N 0.000
BGIOSGA001528 Oryza indica BGIOSGA001528 N 0.000
BGIOSGA026486 Oryza indica BGIOSGA026486 N 0.000
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.000
F775_22386 Aegilops tauschii F775_22386 N 0.000
F775_30314 Aegilops tauschii F775_30314 N 0.000
GRMZM2G006585 Zea mays GRMZM2G006585 N 0.000
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.000
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.000
LPERR01G15600 Leersia perrieri LPERR01G15600 N 0.000
LPERR08G20370 Leersia perrieri LPERR08G20370 N 0.000
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.000
MLOC_26846 Hordeum vulgare MLOC_26846 N 0.000
OB01G27340 Oryza brachyantha OB01G27340 N 0.000
OB08G30470 Oryza brachyantha OB08G30470 N 0.000
OBART01G17820 Oryza barthii OBART01G17820 N 0.000
OBART01G17850 Oryza barthii OBART01G17850 N 0.000
OBART08G23610 Oryza barthii OBART08G23610 N 0.000
OGLUM01G21080 Oryza glumaepatula OGLUM01G21080 N 0.000
OGLUM01G21100 Oryza glumaepatula OGLUM01G21100 N 0.000
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N 0.000
OLONG_020563 Oryza longistaminata OLONG_020563 N 0.000
OMERI01G16650 Oryza meridionalis OMERI01G16650 N 0.000
OMERI01G16670 Oryza meridionalis OMERI01G16670 N 0.000
OMERI08G18450 Oryza meridionalis OMERI08G18450 N 0.000
ONIVA08G26670 Oryza nivara ONIVA08G26670 N 0.000
OPUNC01G18360 Oryza punctata OPUNC01G18360 N 0.000
OPUNC08G21610 Oryza punctata OPUNC08G21610 N 0.000
ORGLA01G0145800 Oryza glaberrima ORGLA01G0145800 N 0.000
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N 0.000
ORGLA11G0204800 Oryza glaberrima ORGLA11G0204800 N 0.000
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N 0.000
OS01G0517800 Oryza sativa OS01G0517800 N 0.000
OS01G0518000 Oryza sativa OS01G0518000 N 0.000
OS08G0560300 Oryza sativa OS08G0560300 N 0.000
Pavir.Ea01651 Panicum virgatum Pavir.Ea01651 N 0.000
Pavir.Eb01352 Panicum virgatum Pavir.Eb01352 N 0.000
Pavir.Eb02108 Panicum virgatum Pavir.Eb02108 N 0.000
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N 0.000
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 0.000
Pavir.J13246 Panicum virgatum Pavir.J13246 N 0.000
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.000
Sb08g005380 Sorghum bicolor Sb08g005380 N 0.000
Si004634m.g Setaria italica Si004634m.g N 0.000
Si004809m.g Setaria italica Si004809m.g N 0.000
TRAES3BF035900070CFD_g Triticum aestivum TRAES3BF035900070CFD_g N 0.000
TRAES3BF035900140CFD_g Triticum aestivum TRAES3BF035900140CFD_g N 0.000
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N 0.000
Traes_3AL_970EF6E45 Triticum aestivum Traes_3AL_970EF6E45 N 0.000
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N 0.000
Traes_3DL_6A5CA5C37 Triticum aestivum Traes_3DL_6A5CA5C37 N 0.000
Traes_3DL_96F825D26 Triticum aestivum Traes_3DL_96F825D26 N 0.000
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.000
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.000
TRIUR3_09966 Triticum urartu TRIUR3_09966 N 0.000
TRIUR3_27842 Triticum urartu TRIUR3_27842 N 0.000