SINV13240 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV13240 T128787_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ttk
M05863_2.00 		Drosophila melanogaster
DTRTCCTKDN
NHMAGGAYAH		 SMiLE-seq
Isakova et al.(2017)
Ttk 		0.794 0.913
ttk
M06469_2.00 		Drosophila melanogaster
RTTATCCTK
MAGGATAAY		 B1H
Mathelier et al.(2014)
MA0460.1 		0.794 0.913
ttk
M06074_2.00 		Drosophila melanogaster
RSMAGGAYMTYB
VRAKRTCCTKSY		 B1H
Zhu et al.(2011)
ttk_FlyReg_FBgn0003870 		0.794 0.913
ttk
M06075_2.00 		Drosophila melanogaster
RTTATCCTK
MAGGATAAY		 B1H
Zhu et al.(2011)
ttk_NAR_FBgn0003870 		0.794 0.913
ttk
M06076_2.00 		Drosophila melanogaster
CHHCCCYTA
TARGGGDDG		 B1H
Zhu et al.(2011)
ttk-PA_SANGER_5_FBgn0003870 		0.794 0.913
ttk
M06077_2.00 		Drosophila melanogaster
TRTCCTK
MAGGAYA		 B1H
Zhu et al.(2011)
ttk-PF_SANGER_5_FBgn0003870 		0.794 0.913
ttk
M09665_2.00 		Drosophila melanogaster
RWKRTCCTKB
VMAGGAYMWY		 Misc
Kulakovskiy et al.(2009)
ttk 		0.794 0.913
ttk
M10378_2.00 		Drosophila melanogaster
SCAGGASC
GSTCCTGS		 Transfac
Matys et al.(2006)
I$TTK69_01 		0.794 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV13240-PA C2H2 ZF 126 154
SINV13240-PA C2H2 ZF 162 185

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.000
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.000
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.000
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.000
Ca_00818 Cicer arietinum Ca_00818 N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
Cla003087 Citrullus lanatus Cla003087 I 0.000
Cla008777 Citrullus lanatus Cla008777 N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.000
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.000
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.000
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.000
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.000
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.000
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N 0.000
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
F775_13455 Aegilops tauschii F775_13455 N 0.000
F775_19761 Aegilops tauschii F775_19761 N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.000
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.000
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.000
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.000
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.000
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.000
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.000
LPERR12G03220 Leersia perrieri LPERR12G03220 N 0.000
Lus10029410.g Linum usitatissimum Lus10029410.g N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
mgf020234m Mimulus guttatus mgf020234m N 0.000
mgf024293m Mimulus guttatus mgf024293m N 0.000
MLOC_60153 Hordeum vulgare MLOC_60153 N 0.000
MTR_4g052620 Medicago truncatula MTR_4g052620 N 0.000
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.000
OB11G12830 Oryza brachyantha OB11G12830 N 0.000
OB12G13350 Oryza brachyantha OB12G13350 N 0.000
OBART01G38190 Oryza barthii OBART01G38190 N 0.000
OBART11G03530 Oryza barthii OBART11G03530 N 0.000
OBART12G03440 Oryza barthii OBART12G03440 N 0.000
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.000
OGLUM03G09050 Oryza glumaepatula OGLUM03G09050 N 0.000
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.000
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.000
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.000
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.000
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.000
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.000
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.000
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.000
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.000
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.000
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.000
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.000
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.000
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.000
OS01G0862800 Oryza sativa OS01G0862800 N 0.000
OS11G0154500 Oryza sativa OS11G0154500 N 0.000
OS12G0156100 Oryza sativa OS12G0156100 N 0.000
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.000
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.000
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.000
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.000
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.000
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.000
Pavir.J38855 Panicum virgatum Pavir.J38855 I 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.000
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.000
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.000
Sb03g040720 Sorghum bicolor Sb03g040720 N 0.000
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.000
Si002586m.g Setaria italica Si002586m.g N 0.000
Si025833m.g Setaria italica Si025833m.g N 0.000
Si026707m.g Setaria italica Si026707m.g N 0.000
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
TCM_022690 Theobroma cacao TCM_022690 N 0.000
TCM_041364 Theobroma cacao TCM_041364 N 0.000
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.000
Traes_5DL_43FC1B296 Triticum aestivum Traes_5DL_43FC1B296 N 0.000
TRIUR3_33275 Triticum urartu TRIUR3_33275 N 0.000
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.000