SKUD_191509 (Saccharomyces kudriavzevii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SKUD_191509 T128957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.803 0.977
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.803 0.977
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.803 0.977
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.803 0.977
MET31
M00040_2.00 		Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN		 PBM
Badis et al.(2008)
MET31_2146 		0.773 0.795
MET31
M07470_2.00 		Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1 		0.773 0.795
MET31
M08543_2.00 		Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB		 Misc
DeBoer et al.(2011)
YPL038W_1370 		0.773 0.795
MET31
M10402_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MET31_01 		0.773 0.795
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT41522 C2H2 ZF 95 117
EJT41522 C2H2 ZF 124 144

Links

Other C2H2 ZF family TFs
Other Saccharomyces kudriavzevii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2E Arabidopsis thaliana AT2G38340 D 0.000
Bostr.23794s0238 Boechera stricta Bostr.23794s0238 I 0.000
Bra005113 Brassica rapa Bra005113 N 0.000
Cagra.5557s0006 Capsella grandiflora Cagra.5557s0006 I 0.000
Carubv10024477m.g Capsella rubella Carubv10024477m.g I 0.000
DREB19 Arabidopsis lyrata fgenesh2_kg.4__1905__AT2G38340.1 I 0.000
Thhalv10017658m.g Eutrema salsugineum Thhalv10017658m.g I 0.000