CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TDEL_0F01170
(
Torulaspora delbrueckii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TDEL_0F01170
T130225_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMR3
M00042_2.00
Saccharomyces cerevisiae
HGTARATCN
NGATYTACD
PBM
Badis et al.(2008)
YPR013C_2104
0.816
0.935
CMR3
M01539_2.00
Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN
PBM
Zhu et al.(2009)
Ypr013c
0.816
0.935
CMR3
M07471_2.00
Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1
0.816
0.935
CMR3
M08545_2.00
Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN
Misc
DeBoer et al.(2011)
YPR013C_859
0.816
0.935
YPR015C
M01540_2.00
Saccharomyces cerevisiae
YTSBBBN
NVVVSAR
PBM
Zhu et al.(2009)
Ypr015c
0.771
0.848
YPR015C
M08546_2.00
Saccharomyces cerevisiae
BNNNDVCGTAAATCMYNDHH
DDHNRKGATTTACGBHNNNV
Misc
DeBoer et al.(2011)
YPR015C_871
0.771
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE92928
C2H2 ZF
101
123
KQCPVCGKVCSRPSTLKTHYLIH
CCE92928
C2H2 ZF
129
153
FKCSWGNCTKSFNVKSNMLRHLKSH
Links
Other
C2H2 ZF
family TFs
Other
Torulaspora delbrueckii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_412282
Selaginella moellendorffii
SELMODRAFT_412282
N
SELMODRAFT_412303
Selaginella moellendorffii
SELMODRAFT_412303
N