CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
UREG_06720
(
Uncinocarpus reesii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
UREG_06720
T131179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.780
0.826
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.780
0.826
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.779
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEP81855
C2H2 ZF
386
411
FKCDYPGCTAEPFQTQYLLNSHANVH
EEP81855
C2H2 ZF
417
446
YYCPVKDCSRSKGRRGFKRKNEMIRHGLVH
EEP81855
C2H2 ZF
451
477
YICPFCSDQQRRYPRPDNLQRHVRAQH
Links
Other
C2H2 ZF
family TFs
Other
Uncinocarpus reesii
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000430401
Angiostrongylus costaricensis
ACOC_0000430401
N
CBG12674
Caenorhabditis briggsae
CBG12674
I
CBN30944
Caenorhabditis brenneri
CBN30944
I
CRE23561
Caenorhabditis remanei
CRE23561
I
HPLM_0001518701
Haemonchus placei
HPLM_0001518701
I
Minc12570
Meloidogyne incognita
Minc12570
I
NBR_0000131901
Nippostrongylus brasiliensis
NBR_0000131901
I
NECAME_14596
Necator americanus
NECAME_14596
I
scaffold142-EXSNAP2012.10
Pristionchus exspectatus
scaffold142-EXSNAP2012.10
I
TCNE_0000019201
Toxocara canis
TCNE_0000019201
I
che-1
Caenorhabditis elegans
WBGene00000483
D