CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0000430401
(
Angiostrongylus costaricensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ACOC_0000430401
T151902_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0000430401-mRNA-1
C2H2 ZF
1
18
CGKSFSQAANLTAHKRVH
ACOC_0000430401-mRNA-1
C2H2 ZF
24
46
FTCPVCSRRFSQSSSLVTHRRTH
ACOC_0000430401-mRNA-1
C2H2 ZF
52
74
YQCNHCDKKFTDSSTLTKHLRTH
ACOC_0000430401-mRNA-1
C2H2 ZF
80
102
YCCDVCFMRFTQSGNLHRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Angiostrongylus costaricensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000131901
Nippostrongylus brasiliensis
NBR_0000131901
I
0.790
NECAME_14596
Necator americanus
NECAME_14596
I
0.787
maker-nMf.1.1.scaf05782-augustus-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf05782-augustus-gene-0.8
I
0.780
Minc12570
Meloidogyne incognita
Minc12570
I
0.778
TCNE_0000019201
Toxocara canis
TCNE_0000019201
I
0.775
HPLM_0001518701
Haemonchus placei
HPLM_0001518701
I
0.772
scaffold142-EXSNAP2012.10
Pristionchus exspectatus
scaffold142-EXSNAP2012.10
I
0.757