VIT_07s0129g00240 (Vitis vinifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VIT_07s0129g00240 T131464_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.820 0.891
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.802 0.870
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.800 0.739
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.800 0.717
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.798 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.798 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.798 0.826
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.788 0.804
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.788 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.777 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_07s0129g00240.t01 C2H2 ZF 85 107
VIT_07s0129g00240.t01 C2H2 ZF 139 161

Links

Other C2H2 ZF family TFs
Other Vitis vinifera TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG005558.1 Alligator sinensis Alligator_sinensis_CCG005558.1 I 0.000
ZNF282 Bos taurus ENSBTAG00000020448 I 0.000
ENSCSAG00000007010 Chlorocebus sabaeus ENSCSAG00000007010 I 0.000
ZNF282 Dasypus novemcinctus ENSDNOG00000008361 I 0.000
ZNF282 Homo sapiens ENSG00000170265 D 0.000
ZNF398 Gorilla gorilla ENSGGOG00000005812 I 0.000
ENSMICG00000016620 Microcebus murinus ENSMICG00000016620 I 0.000
ZNF282 Myotis lucifugus ENSMLUG00000010622 I 0.000
ZNF282 Macaca mulatta ENSMMUG00000000767 I 0.000
ZNF282 Monodelphis domestica ENSMODG00000001987 I 0.000
ENSMPUG00000006666 Mustela putorius furo ENSMPUG00000006666 I 0.000
Zfp282 Mus musculus ENSMUSG00000025821 I 0.000
ZNF282 Oryctolagus cuniculus ENSOCUG00000008423 I 0.000
ZNF282 Ochotona princeps ENSOPRG00000010540 I 0.000
ENSPANG00000008719 Papio anubis ENSPANG00000008719 I 0.000
ENSPPYG00000018151 Pongo abelii ENSPPYG00000018151 I 0.000
ZNF282 Pan troglodytes ENSPTRG00000019841 I 0.000
Zfp282 Rattus norvegicus ENSRNOG00000026981 I 0.000
ENSSHAG00000018278 Sarcophilus harrisii ENSSHAG00000018278 I 0.000
ZNF282 Sus scrofa ENSSSCG00000016773 I 0.000
ENSSTOG00000021295 Ictidomys tridecemlineatus ENSSTOG00000021295 I 0.000
ZNF282 Tupaia belangeri ENSTBEG00000000091 I 0.000
ZNF282 Tursiops truncatus ENSTTRG00000015685 I 0.000
Myotis_brandtii_ZNF282_10025638 Myotis brandtii Myotis_brandtii_ZNF282_10025638 I 0.000