CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10009517
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10009517
T134334_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10009517
C2H2 ZF
541
563
IKCTECGMVFQRRYSLIMHTLKH
Cmyd_10009517
C2H2 ZF
569
591
YKCPLCKKEFQYGASLRAHLVRH
Cmyd_10009517
C2H2 ZF
620
642
FICDICGRTLPKLYALRIHMLKH
Cmyd_10009517
C2H2 ZF
648
670
HACKVCGKAFTYKHGLKMHLALH
Cmyd_10009517
C2H2 ZF
676
698
FKCDLCEKSFVTKRSLQEHMSIH
Cmyd_10009517
C2H2 ZF
704
726
YLCSICGKSFHRASGLSKHIKKH
Cmyd_10009517
C2H2 ZF
735
757
YQCTQCEKSFYEARDLRQHMNKH
Cmyd_10009517
C2H2 ZF
763
785
FQCEFCGKCYSWKKDWYSHVKSH
Cmyd_10009517
C2H2 ZF
791
815
YRCNVCGKEFYEKALYRRHVKKATH
Cmyd_10009517
C2H2 ZF
828
849
VCEHCGRKFTQLREYRRHMNNH
Cmyd_10009517
C2H2 ZF
855
877
FECLTCGVAWADARSLKRHVRTH
Cmyd_10009517
C2H2 ZF
883
906
YVCPVCNEAYIDARTLRKHMTKFH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R015641
Calypte anna
Aan_R015641
N
0.788
Alligator_sinensis_CCG003021.1
Alligator sinensis
Alligator_sinensis_CCG003021.1
N
0.780
Brh_R006837
Buceros rhinoceros
Brh_R006837
N
0.788
ZBTB11
Anolis carolinensis
ENSACAG00000011934
N
0.775
ENSAPLG00000003432
Anas platyrhynchos
ENSAPLG00000003432
N
0.782
ZBTB11
Gallus gallus
ENSGALG00000015334
N
0.789
ZBTB11
Meleagris gallopavo
ENSMGAG00000017008
N
0.788
ENSPSIG00000004062
Pelodiscus sinensis
ENSPSIG00000004062
N
0.826
Pvit_02185
Pogona vitticeps
Pvit_02185
N
0.769
Tal_R011798
Tyto alba
Tal_R011798
N
0.784