CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10009517
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10009517
T134334_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10009517
C2H2 ZF
541
563
IKCTECGMVFQRRYSLIMHTLKH
Cmyd_10009517
C2H2 ZF
569
591
YKCPLCKKEFQYGASLRAHLVRH
Cmyd_10009517
C2H2 ZF
620
642
FICDICGRTLPKLYALRIHMLKH
Cmyd_10009517
C2H2 ZF
648
670
HACKVCGKAFTYKHGLKMHLALH
Cmyd_10009517
C2H2 ZF
676
698
FKCDLCEKSFVTKRSLQEHMSIH
Cmyd_10009517
C2H2 ZF
704
726
YLCSICGKSFHRASGLSKHIKKH
Cmyd_10009517
C2H2 ZF
735
757
YQCTQCEKSFYEARDLRQHMNKH
Cmyd_10009517
C2H2 ZF
763
785
FQCEFCGKCYSWKKDWYSHVKSH
Cmyd_10009517
C2H2 ZF
791
815
YRCNVCGKEFYEKALYRRHVKKATH
Cmyd_10009517
C2H2 ZF
828
849
VCEHCGRKFTQLREYRRHMNNH
Cmyd_10009517
C2H2 ZF
855
877
FECLTCGVAWADARSLKRHVRTH
Cmyd_10009517
C2H2 ZF
883
906
YVCPVCNEAYIDARTLRKHMTKFH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000004062
Pelodiscus sinensis
ENSPSIG00000004062
N
0.826
ZBTB11
Gallus gallus
ENSGALG00000015334
N
0.789
ZBTB11
Meleagris gallopavo
ENSMGAG00000017008
N
0.788
Aan_R015641
Calypte anna
Aan_R015641
N
0.788
Brh_R006837
Buceros rhinoceros
Brh_R006837
N
0.788
Tal_R011798
Tyto alba
Tal_R011798
N
0.784
ENSAPLG00000003432
Anas platyrhynchos
ENSAPLG00000003432
N
0.782
Alligator_sinensis_CCG003021.1
Alligator sinensis
Alligator_sinensis_CCG003021.1
N
0.780
ZBTB11
Anolis carolinensis
ENSACAG00000011934
N
0.775
Pvit_02185
Pogona vitticeps
Pvit_02185
N
0.769