CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R015298
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R015298
T135874_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R015298
C2H2 ZF
504
526
FSCSVCASSFVDRQLLEKHLAVH
Gfo_R015298
C2H2 ZF
534
556
FQCHFCSQSFKLEAAYRYHVSQH
Gfo_R015298
C2H2 ZF
602
624
YSCKVCGKRFAHTSEFNYHRRIH
Gfo_R015298
C2H2 ZF
630
652
YQCKVCHKFFRGRSTIKCHLRTH
Gfo_R015298
C2H2 ZF
658
680
YRCTVCGHYSSTLNLMSKHIGVH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.20821s0001
Boechera stricta
Bostr.20821s0001
N
Cla010586
Citrullus lanatus
Cla010586
I
MTR_5g070020
Medicago truncatula
MTR_5g070020
N
Thhalv10015404m.g
Eutrema salsugineum
Thhalv10015404m.g
N
Thhalv10027294m.g
Eutrema salsugineum
Thhalv10027294m.g
N