Cla010586 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla010586 T283213_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.742 0.871
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.742 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla010586 Myb 216 262
Cla010586 Myb 268 313

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.850
29917.m001977 Ricinus communis 29917.m001977 I 0.817
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.793
Pm015681 Prunus mume Pm015681 I 0.784
MYB118 Populus trichocarpa POPTR_0001s35140 I 0.775
MDP0000199939 Malus domestica MDP0000199939 I 0.754
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.749
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I 0.743
MYB118 Arabidopsis thaliana AT3G27785 D 0.742
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I 0.742
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.737
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I 0.734
Bra025299 Brassica rapa Bra025299 I 0.730
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I 0.728
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I 0.725
Carubv10018693m.g Capsella rubella Carubv10018693m.g I 0.725
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I 0.723
mgf024290m Mimulus guttatus mgf024290m I 0.721
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.721
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.720
VIT_14s0066g01010 Vitis vinifera VIT_14s0066g01010 I 0.718
TCM_016909 Theobroma cacao TCM_016909 I 0.716
30147.m013937 Ricinus communis 30147.m013937 I 0.716
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.716
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.716
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.711
Pm024743 Prunus mume Pm024743 I 0.711
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.711
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.710
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.710
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.708
AMTR_s00001p00272410 Amborella trichopoda AMTR_s00001p00272410 N 0.705
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.705
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.700
Cla019490 Citrullus lanatus Cla019490 I 0.699
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.696
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.696
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.696
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.696
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.693
MTR_4g105660 Medicago truncatula MTR_4g105660 N 0.693
Bo2g144970 Brassica oleracea Bo2g144970 I 0.692
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.691
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.688
Ciclev10017526m.g Citrus clementina Ciclev10017526m.g I 0.688
orange1.1g044021m.g Citrus sinensis orange1.1g044021m.g I 0.688
TCM_012087 Theobroma cacao TCM_012087 I 0.687
MDP0000215359 Malus domestica MDP0000215359 I 0.687
Bra033027 Brassica rapa Bra033027 I 0.683
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.681
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.681
Lus10027695.g Linum usitatissimum Lus10027695.g I 0.680
Lus10039966.g Linum usitatissimum Lus10039966.g I 0.680
Lus10042111.g Linum usitatissimum Lus10042111.g I 0.676
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.674
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.671
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.671
Ca_17294 Cicer arietinum Ca_17294 I 0.670
evm.TU.supercontig_108.29 Carica papaya evm.TU.supercontig_108.29 I 0.668
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.668
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.668
VIT_06s0004g06280 Vitis vinifera VIT_06s0004g06280 N 0.663
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.662
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.662
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.662