Pvit_15789 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_15789 T137438_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm16
M08997_2.00 		Mus musculus
BBCYCTGGGR
YCCCAGRGVV		 Misc
Kulakovskiy et al.(2013)
PRD16_MOUSE.H11MO.0.B 		0.825 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_15789 C2H2 ZF 36 58
Pvit_15789 C2H2 ZF 64 86
Pvit_15789 C2H2 ZF 92 115
Pvit_15789 C2H2 ZF 121 143
Pvit_15789 C2H2 ZF 149 171
Pvit_15789 C2H2 ZF 178 199
Pvit_15789 C2H2 ZF 703 725
Pvit_15789 C2H2 ZF 731 754
Pvit_15789 C2H2 ZF 760 782

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001391.4 Alligator sinensis Alligator_sinensis_CCG001391.4 I
MAZ Anolis carolinensis ENSACAG00000014698 I
ENSAMEG00000014864 Ailuropoda melanoleuca ENSAMEG00000014864 I
ENSBTAP00000026016-D1 Bos grunniens ENSBTAP00000026016-D1 I
MAZ Cavia porcellus ENSCPOG00000019886 I
ENSECAG00000024341 Equus caballus ENSECAG00000024341 I
MAZ Homo sapiens ENSG00000103495 D
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I
ENSGMOG00000001761 Gadus morhua ENSGMOG00000001761 I
Maz Mus musculus ENSMUSG00000030678 D
ENSNLEG00000007559 Nomascus leucogenys ENSNLEG00000007559 I
MAZ Otolemur garnettii ENSOGAG00000033940 I
ENSORLG00000000210 Oryzias latipes ENSORLG00000000210 N
MAZ Pan troglodytes ENSPTRG00000007968 I
Maz Rattus norvegicus ENSRNOG00000055082 I
MAZ Sus scrofa ENSSSCG00000025321 I
ENSSTOG00000027842 Ictidomys tridecemlineatus ENSSTOG00000027842 I
ENSTRUG00000004091 Takifugu rubripes ENSTRUG00000004091 N
Myotis_brandtii_MAZ_10014461 Myotis brandtii Myotis_brandtii_MAZ_10014461 I
Pvit_12096 Pogona vitticeps Pvit_12096 I