Pvit_15789 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_15789 T137438_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm16
M08997_2.00 		Mus musculus
BBCYCTGGGR
YCCCAGRGVV		 Misc
Kulakovskiy et al.(2013)
PRD16_MOUSE.H11MO.0.B 		0.825 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_15789 C2H2 ZF 36 58
Pvit_15789 C2H2 ZF 64 86
Pvit_15789 C2H2 ZF 92 115
Pvit_15789 C2H2 ZF 121 143
Pvit_15789 C2H2 ZF 149 171
Pvit_15789 C2H2 ZF 178 199
Pvit_15789 C2H2 ZF 703 725
Pvit_15789 C2H2 ZF 731 754
Pvit_15789 C2H2 ZF 760 782

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Prdm16 Mus musculus ENSMUSG00000039410 D 0.825
PRDM16 Pan troglodytes ENSPTRG00000000059 I 0.825
Prdm16 Rattus norvegicus ENSRNOG00000045913 I 0.825
ENSMPUG00000007479 Mustela putorius furo ENSMPUG00000007479 I 0.812
PRDM16 Danio rerio ENSDARG00000078324 I 0.801