cassava27353.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava27353.m1 T137849_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava27353.m1 C2H2 ZF 2 25
cassava27353.m1 C2H2 ZF 31 51

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G27970 Arabidopsis thaliana AT3G27970 N 0.758
Bo2g146110 Brassica oleracea Bo2g146110 N 0.757
Bra033033 Brassica rapa Bra033033 N 0.786
Ciclev10015764m.g Citrus clementina Ciclev10015764m.g N 0.762
Cucsa.159050 Cucumis sativus Cucsa.159050 N 0.759
Eucgr.I01798 Eucalyptus grandis Eucgr.I01798 N 0.762
evm.TU.supercontig_39.83 Carica papaya evm.TU.supercontig_39.83 N 0.803
GLYMA19G11090 Glycine max GLYMA19G11090 N 0.774
Gorai.007G340600 Gossypium raimondii Gorai.007G340600 N 0.786
Lus10008787.g Linum usitatissimum Lus10008787.g N 0.774
Lus10022230.g Linum usitatissimum Lus10022230.g N 0.774
MDP0000196563 Malus domestica MDP0000196563 N 0.762
orange1.1g018558m.g Citrus sinensis orange1.1g018558m.g N 0.762
Pavir.Aa00794 Panicum virgatum Pavir.Aa00794 N 0.763
Pavir.Ab02840 Panicum virgatum Pavir.Ab02840 N 0.763
Pm015710 Prunus mume Pm015710 N 0.764
PRUPE_ppa008078mg Prunus persica PRUPE_ppa008078mg N 0.764
Si019142m.g Setaria italica Si019142m.g N 0.763