Pavir.Aa00794 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Aa00794 T143298_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa00794.1.p C2H2 ZF 14 37
Pavir.Aa00794.1.p C2H2 ZF 43 63

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si019142m.g Setaria italica Si019142m.g N 0.827
Pavir.Ab02840 Panicum virgatum Pavir.Ab02840 N 0.827
GRMZM2G127846 Zea mays GRMZM2G127846 N 0.797
Bra033033 Brassica rapa Bra033033 N 0.778
Gorai.007G340600 Gossypium raimondii Gorai.007G340600 N 0.770
cassava27353.m1 Manihot esculenta cassava27353.m1 N 0.763
evm.TU.supercontig_39.83 Carica papaya evm.TU.supercontig_39.83 N 0.763