Cucsa.219210 (Cucumis sativus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cucsa.219210 T137927_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.770 0.826
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.765 0.804
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.758 0.783
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.758 0.783
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.758 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.219210.1 C2H2 ZF 93 115
Cucsa.219210.1 C2H2 ZF 145 167

Links

Other C2H2 ZF family TFs
Other Cucumis sativus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00597.1 Alternaria brassicicola AB00597.1 N 0.000
AB03935.1 Alternaria brassicicola AB03935.1 N 0.000
AUEXF2481DRAFT_61161 Aureobasidium subglaciale AUEXF2481DRAFT_61161 N 0.000
BAUCODRAFT_138682 Baudoinia compniacensis BAUCODRAFT_138682 N 0.000
COCC4DRAFT_124149 Bipolaris maydis COCC4DRAFT_124149 N 0.000
COCC4DRAFT_200873 Bipolaris maydis COCC4DRAFT_200873 N 0.000
COCCADRAFT_3377 Bipolaris zeicola COCCADRAFT_3377 N 0.000
COCCADRAFT_99387 Bipolaris zeicola COCCADRAFT_99387 N 0.000
COCMIDRAFT_21935 Bipolaris oryzae COCMIDRAFT_21935 N 0.000
COCMIDRAFT_82835 Bipolaris oryzae COCMIDRAFT_82835 N 0.000
COCSADRAFT_155567 Bipolaris sorokiniana COCSADRAFT_155567 N 0.000
COCSADRAFT_40583 Bipolaris sorokiniana COCSADRAFT_40583 N 0.000
COCVIDRAFT_26374 Bipolaris victoriae COCVIDRAFT_26374 N 0.000
DOTSEDRAFT_75913 Dothistroma septosporum DOTSEDRAFT_75913 N 0.000
estExt_Genewise1Plus.C_20945 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_20945 N 0.000
fgenesh1_pg.C_chr_12000059 Mycosphaerella graminicola fgenesh1_pg.C_chr_12000059 N 0.000
fgenesh1_pg.C_scaffold_13000086 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_13000086 N 0.000
LEMA_P046620.1 Leptosphaeria maculans LEMA_P046620.1 N 0.000
M437DRAFT_55860 Aureobasidium melanogenum M437DRAFT_55860 I 0.000
M438DRAFT_332335 Aureobasidium pullulans M438DRAFT_332335 N 0.000
Mycgr3G96927 Zymoseptoria tritici Mycgr3G96927 N 0.000
PTRG_04376 Pyrenophora triticirepentis PTRG_04376 N 0.000
PTRG_08828 Pyrenophora triticirepentis PTRG_08828 N 0.000
PTT_01276 Pyrenophora teres PTT_01276 N 0.000
PTT_14925 Pyrenophora teres PTT_14925 N 0.000
SEPMUDRAFT_152192 Sphaerulina musiva SEPMUDRAFT_152192 N 0.000
SETTUDRAFT_135369 Setosphaeria turcica SETTUDRAFT_135369 N 0.000
SETTUDRAFT_161746 Setosphaeria turcica SETTUDRAFT_161746 N 0.000
SNOG_08725 Phaeosphaeria nodorum SNOG_08725 N 0.000
SNOG_08725 Stagonospora nodorum SNOG_08725 N 0.000