Ocbimv22026834m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22026834m.g T141634_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.771 0.867
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.771 0.867
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.771 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22026834m.p C2H2 ZF 64 86
Ocbimv22026834m.p C2H2 ZF 96 117
Ocbimv22026834m.p C2H2 ZF 121 143
Ocbimv22026834m.p C2H2 ZF 149 171
Ocbimv22026834m.p C2H2 ZF 177 198

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_01726 Trichosporon asahii A1Q1_01726 N
CERSUDRAFT_110542 Ceriporiopsis subvermispora CERSUDRAFT_110542 N
CY34DRAFT_289505 Suillus luteus CY34DRAFT_289505 N
estExt_fgeneshTM_pg.C_10641 Tremella mesenterica estExt_fgeneshTM_pg.C_10641 N
EuGene1000576 Heterobasidion annosum EuGene1000576 N
GALMADRAFT_233709 Galerina marginata GALMADRAFT_233709 N
GLOTRDRAFT_135357 Gloeophyllum trabeum GLOTRDRAFT_135357 N
HETIRDRAFT_377690 Heterobasidion irregulare HETIRDRAFT_377690 N
JAAARDRAFT_148211 Jaapia argillacea JAAARDRAFT_148211 N
L804_05452 Cryptococcus gattii L804_05452 N
M378DRAFT_194984 Amanita muscaria M378DRAFT_194984 N
M407DRAFT_245661 Tulasnella calospora M407DRAFT_245661 N
M408DRAFT_94738 Serendipita vermifera M408DRAFT_94738 N
M413DRAFT_439801 Hebeloma cylindrosporum M413DRAFT_439801 N
Moror_1763 Moniliophthora roreri Moror_1763 N
PHACADRAFT_256950 Phanerochaete carnosa PHACADRAFT_256950 N
PHLGIDRAFT_107482 Phlebiopsis gigantea PHLGIDRAFT_107482 N
PHLGIDRAFT_180507 Phlebiopsis gigantea PHLGIDRAFT_180507 N
PILCRDRAFT_611893 Piloderma croceum PILCRDRAFT_611893 N
PILCRDRAFT_813552 Piloderma croceum PILCRDRAFT_813552 N
PILCRDRAFT_817333 Piloderma croceum PILCRDRAFT_817333 N
SCHCODRAFT_104061 Schizophyllum commune SCHCODRAFT_104061 N
SERLA73DRAFT_84116 Serpula lacrymans SERLA73DRAFT_84116 N
V565_007950 Rhizoctonia solani V565_007950 N
V565_049440 Rhizoctonia solani V565_049440 N
V565_081200 Rhizoctonia solani V565_081200 N