Ocbimv22026834m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22026834m.g T141634_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.771 0.867
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.771 0.867
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.771 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22026834m.p C2H2 ZF 64 86
Ocbimv22026834m.p C2H2 ZF 96 117
Ocbimv22026834m.p C2H2 ZF 121 143
Ocbimv22026834m.p C2H2 ZF 149 171
Ocbimv22026834m.p C2H2 ZF 177 198

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGI_10005451 Crassostrea gigas CGI_10005451 I 0.794
CapteG19364 Capitella teleta CapteG19364 I 0.792
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I 0.792
e_gw.6.95.1 Branchiostoma floridae e_gw.6.95.1 I 0.790
BGLB003738 Biomphalaria glabrata BGLB003738 I 0.790
L798_08219 Zootermopsis nevadensis L798_08219 I 0.782
ACEP27778 Atta cephalotes ACEP27778 I 0.780
SINV14822 Solenopsis invicta SINV14822 I 0.780
GB42492 Apis mellifera GB42492 I 0.778
PHUM530390 Pediculus humanus PHUM530390 I 0.778
tetur14g01820 Tetranychus urticae tetur14g01820 I 0.778
YQE_07798 Dendroctonus ponderosae YQE_07798 I 0.778
LDEC013204 Leptinotarsa decemlineata LDEC013204 I 0.778
GF25038 Drosophila ananassae FBgn0102030 I 0.773
GG14656 Drosophila erecta FBgn0106912 I 0.773
GI16731 Drosophila mojavensis FBgn0139479 I 0.773
GJ12475 Drosophila virilis FBgn0199717 I 0.773
LCUP006416 Lucilia cuprina LCUP006416 I 0.773
MDOA000347 Musca domestica MDOA000347 I 0.773
ADAC007927 Anopheles darlingi ADAC007927 I 0.771
Kah Drosophila melanogaster FBgn0035144 D 0.771
GA14370 Drosophila pseudoobscura FBgn0074398 I 0.771
GH15211 Drosophila grimshawi FBgn0122686 I 0.771
GM14272 Drosophila sechellia FBgn0169198 I 0.771
GK17557 Drosophila willistoni FBgn0219556 I 0.771
TC002803 Tribolium castaneum TC002803 I 0.771
AALB005349 Anopheles albimanus AALB005349 I 0.771
AATE004981 Anopheles atroparvus AATE004981 I 0.769
LLOJ001905 Lutzomyia longipalpis LLOJ001905 I 0.768
NV16451 Nasonia vitripennis NV16451 I 0.766
ACYPI001198 Acyrthosiphon pisum ACYPI001198 I 0.764
CpipJ_CPIJ005455 Culex pipiens CpipJ_CPIJ005455 I 0.762
AAEL003978 Aedes aegypti AAEL003978 I 0.762
CPIJ005455 Culex quinquefasciatus CPIJ005455 I 0.762
GE21016 Drosophila yakuba FBgn0238298 I 0.761
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I 0.759
HelroG68814 Helobdella robusta HelroG68814 N 0.759