Cagra.19122s0001 (Capsella grandiflora)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cagra.19122s0001 T142651_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.19122s0001.1.p C2H2 ZF 33 55

Links

Other C2H2 ZF family TFs
Other Capsella grandiflora TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g120870 Brassica oleracea Bo2g120870 N
Bra031820 Brassica rapa Bra031820 N
evm.TU.supercontig_216.26 Carica papaya evm.TU.supercontig_216.26 N
GLYMA01G27910 Glycine max GLYMA01G27910 N
GLYMA10G02501 Glycine max GLYMA10G02501 N
LjSGA_035034.1 Lotus japonicus LjSGA_035034.1 N
LPERR01G37530 Leersia perrieri LPERR01G37530 N
MDP0000501042 Malus domestica MDP0000501042 N
MDP0000844509 Malus domestica MDP0000844509 N
mgf023939m Mimulus guttatus mgf023939m N
OLONG_003514 Oryza longistaminata OLONG_003514 N
OLONG_008057 Oryza longistaminata OLONG_008057 N
OLONG_014599 Oryza longistaminata OLONG_014599 N
OLONG_017398 Oryza longistaminata OLONG_017398 N
OMERI01G40020 Oryza meridionalis OMERI01G40020 N
Pavir.Ib03390 Panicum virgatum Pavir.Ib03390 N
PDK_20s1331901g003 Phoenix dactylifera PDK_20s1331901g003 N
SELMODRAFT_9104 Selaginella moellendorffii SELMODRAFT_9104 N
SELMODRAFT_9108 Selaginella moellendorffii SELMODRAFT_9108 N
SELMODRAFT_9114 Selaginella moellendorffii SELMODRAFT_9114 N
TRAES3BF231500020CFD_g Triticum aestivum TRAES3BF231500020CFD_g N
Traes_4BL_C7F1E5ECA Triticum aestivum Traes_4BL_C7F1E5ECA N
TRIUR3_22849 Triticum urartu TRIUR3_22849 N
TRIUR3_34542 Triticum urartu TRIUR3_34542 N