CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_216.26
(
Carica papaya
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
evm.TU.supercontig_216.26
T142905_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_216.26
C2H2 ZF
82
104
FICEICNKGFQRDQNLQLHRRGH
Links
Other
C2H2 ZF
family TFs
Other
Carica papaya
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_9104
Selaginella moellendorffii
SELMODRAFT_9104
N
0.827
GLYMA01G27910
Glycine max
GLYMA01G27910
N
0.827
SELMODRAFT_9114
Selaginella moellendorffii
SELMODRAFT_9114
N
0.827
PDK_20s1331901g003
Phoenix dactylifera
PDK_20s1331901g003
N
0.815
Traes_4BL_C7F1E5ECA
Triticum aestivum
Traes_4BL_C7F1E5ECA
N
0.779
TRAES3BF231500020CFD_g
Triticum aestivum
TRAES3BF231500020CFD_g
N
0.779
Pavir.Ib03390
Panicum virgatum
Pavir.Ib03390
N
0.779
LjSGA_035034.1
Lotus japonicus
LjSGA_035034.1
N
0.779
TRIUR3_34542
Triticum urartu
TRIUR3_34542
N
0.779
TRIUR3_22849
Triticum urartu
TRIUR3_22849
N
0.779
SELMODRAFT_9108
Selaginella moellendorffii
SELMODRAFT_9108
N
0.779
LPERR01G37530
Leersia perrieri
LPERR01G37530
N
0.779
GSMUA_Achr7G24170_001
Musa acuminata
GSMUA_Achr7G24170_001
N
0.779
OLONG_003514
Oryza longistaminata
OLONG_003514
N
0.779
OLONG_014599
Oryza longistaminata
OLONG_014599
N
0.779
OMERI01G40020
Oryza meridionalis
OMERI01G40020
N
0.779
OLONG_017398
Oryza longistaminata
OLONG_017398
N
0.767
Bo2g120870
Brassica oleracea
Bo2g120870
N
0.767
mgf023939m
Mimulus guttatus
mgf023939m
N
0.767