CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10012266m.g
(
Capsella rubella
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Carubv10012266m.g
T142716_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10012266m
C2H2 ZF
222
243
YSCRICGKLLAVKGDWRTHEKN
Carubv10012266m
C2H2 ZF
242
268
KNCGKRWVCICGSDFKHKRSLKDHVKA
Links
Other
C2H2 ZF
family TFs
Other
Capsella rubella
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_09512
Beauveria bassiana
BBA_09512
N
0.000
ANIA_06293
Aspergillus nidulans
CADANIAG00010534
N
0.000
CCM_08978
Cordyceps militaris
CCM_08978
I
0.000
CPC735_064880
Coccidioides posadasii
CPC735_064880
N
0.000
estExt_Genewise1Plus.C_20430
Cryphonectria parasitica
estExt_Genewise1Plus.C_20430
N
0.000
estExt_Genewise1Plus.C_chr_130174
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_130174
N
0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00440
Nectria haematococca
estExt_Genewise1Plus.C_sca_8_chr1_1_00440
I
0.000
EURHEDRAFT_513555
Aspergillus ruber
EURHEDRAFT_513555
N
0.000
FFUJ_03763
Fusarium fujikuroi
FFUJ_03763
I
0.000
FGRRES_01562
Fusarium graminearum
FGRRES_01562
I
0.000
FOXG_11146
Fusarium oxysporum
FOXG_11146
I
0.000
GGTG_11194
Gaeumannomyces graminis
GGTG_11194
I
0.000
M422DRAFT_215363
Sphaerobolus stellatus
M422DRAFT_215363
N
0.000
M422DRAFT_232009
Sphaerobolus stellatus
M422DRAFT_232009
N
0.000
MAJ_06041
Metarhizium majus
MAJ_06041
I
0.000
MAPG_00750
Magnaporthe poae
MAPG_00750
I
0.000
MBR_06803
Metarhizium brunneum
MBR_06803
I
0.000
MCYG_04265
Microsporum canis
MCYG_04265
N
0.000
MGU_04562
Metarhizium guizhouense
MGU_04562
I
0.000
Mycgr3G77753
Zymoseptoria tritici
Mycgr3G77753
N
0.000
NechaG65166
Fusarium solani
NechaG65166
I
0.000
OCS_05478
Ophiocordyceps sinensis
OCS_05478
I
0.000
PV04_07332
Capronia semiimmersa
PV04_07332
N
0.000
PV05_10153
Exophiala xenobiotica
PV05_10153
N
0.000
PV06_09439
Exophiala oligosperma
PV06_09439
N
0.000
PV07_11052
Cladophialophora immunda
PV07_11052
N
0.000
PV10_03194
Exophiala mesophila
PV10_03194
N
0.000
PV11_09075
Exophiala sideris
PV11_09075
N
0.000
RO3G_02623
Rhizopus oryzae
RO3G_02623
N
0.000
TESG_01285
Trichophyton tonsurans
TESG_01285
N
0.000
TRIREDRAFT_78799
Trichoderma reesei
TRIREDRAFT_78799
I
0.000
TRIVIDRAFT_163283
Trichoderma virens
TRIVIDRAFT_163283
N
0.000
VHEMI05725
Torrubiella hemipterigena
VHEMI05725
I
0.000
X797_000023
Metarhizium robertsii
X797_000023
I
0.000