SapurV1A.0015s0990 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0015s0990 T143446_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD7
M06803_2.00 		Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN		 Dap-seq
OMalley et al.(2016)
IDD7_col_a 		0.827 0.977
IDD4
M06809_2.00 		Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW		 Dap-seq
OMalley et al.(2016)
IDD4_col_a 		0.827 0.930
MGP
M06795_2.00 		Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND		 Dap-seq
OMalley et al.(2016)
MGP_col_a 		0.827 0.930
MGP
M06796_2.00 		Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN		 Dap-seq
OMalley et al.(2016)
MGP_colamp_a 		0.827 0.930
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.822 0.953
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.822 0.953
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.822 0.907
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.822 0.907
NUC
M06822_2.00 		Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD
HRVWARAMGACAAAANNNNN		 Dap-seq
OMalley et al.(2016)
NUC_col_a 		0.803 0.907
NUC
M06823_2.00 		Arabidopsis thaliana
NDTTTTGTCGTYTWNYD
HRNWARACGACAAAAHN		 Dap-seq
OMalley et al.(2016)
NUC_colamp_a 		0.803 0.907
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.797 0.953
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.794 0.953
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.794 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0015s0990.1.p C2H2 ZF 149 170
SapurV1A.0015s0990.1.p C2H2 ZF 169 195

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

645 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002089 Ricinus communis 29736.m002089 I
29912.m005387 Ricinus communis 29912.m005387 I
30147.m014028 Ricinus communis 30147.m014028 I
30147.m014337 Ricinus communis 30147.m014337 I
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I
Aquca_001_00103 Aquilegia coerulea Aquca_001_00103 I
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I
AT1G19000 Arabidopsis thaliana AT1G19000 D
AT1G70000 Arabidopsis thaliana AT1G70000 I
AT1G74840 Arabidopsis thaliana AT1G74840 D
KUA1 Arabidopsis thaliana AT5G47390 D
BGIOSGA002215 Oryza indica BGIOSGA002215 I
BGIOSGA018651 Oryza indica BGIOSGA018651 I
BGIOSGA027973 Oryza indica BGIOSGA027973 I
BGIOSGA027987 Oryza indica BGIOSGA027987 I
BGIOSGA031396 Oryza indica BGIOSGA031396 I
MYBS2 Oryza indica BGIOSGA031397 I
Bo2g066810 Brassica oleracea Bo2g066810 I
Bo2g132340 Brassica oleracea Bo2g132340 I
Bo2g161470 Brassica oleracea Bo2g161470 I
Bo3g019630 Brassica oleracea Bo3g019630 I
Bo6g094990 Brassica oleracea Bo6g094990 I
Bo6g119010 Brassica oleracea Bo6g119010 I
Bo7g098880 Brassica oleracea Bo7g098880 I
Bo7g105100 Brassica oleracea Bo7g105100 I
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I
Bostr.14419s0032 Boechera stricta Bostr.14419s0032 I
Bostr.3288s0130 Boechera stricta Bostr.3288s0130 I
Bostr.7128s0505 Boechera stricta Bostr.7128s0505 I
Bra003969 Brassica rapa Bra003969 I
Bra006853 Brassica rapa Bra006853 I
Bra007892 Brassica rapa Bra007892 I
Bra012665 Brassica rapa Bra012665 I
Bra015890 Brassica rapa Bra015890 I
Bra022127 Brassica rapa Bra022127 I
Bra029320 Brassica rapa Bra029320 I
BRADI3G17170 Brachypodium distachyon BRADI3G17170 I
BRADI3G33440 Brachypodium distachyon BRADI3G33440 I
Cagra.0402s0045 Capsella grandiflora Cagra.0402s0045 I
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I
Cagra.1415s0002 Capsella grandiflora Cagra.1415s0002 I
Cagra.1961s0096 Capsella grandiflora Cagra.1961s0096 I
Carubv10011841m.g Capsella rubella Carubv10011841m.g I
Carubv10020668m.g Capsella rubella Carubv10020668m.g I
Carubv10020813m.g Capsella rubella Carubv10020813m.g I
Carubv10026634m.g Capsella rubella Carubv10026634m.g I
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I
cassava18869.valid.m1 Manihot esculenta cassava18869.valid.m1 I
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I
cassava29981.valid.m1 Manihot esculenta cassava29981.valid.m1 I
cassava43855.valid.m1 Manihot esculenta cassava43855.valid.m1 I
Ca_05889 Cicer arietinum Ca_05889 I
Ca_15538 Cicer arietinum Ca_15538 I
Ca_17597 Cicer arietinum Ca_17597 I
Ca_17598 Cicer arietinum Ca_17598 I
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I
chr2.CM0373.230.nd Lotus japonicus chr2.CM0373.230.nd I
chr4.CM0004.450.nd Lotus japonicus chr4.CM0004.450.nd I
Ciclev10006714m.g Citrus clementina Ciclev10006714m.g I
Ciclev10006771m.g Citrus clementina Ciclev10006771m.g I
Ciclev10009128m.g Citrus clementina Ciclev10009128m.g I
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I
Cla000916 Citrullus lanatus Cla000916 I
Cla010296 Citrullus lanatus Cla010296 I
Cla010879 Citrullus lanatus Cla010879 I
Cla019445 Citrullus lanatus Cla019445 I
Cucsa.094040 Cucumis sativus Cucsa.094040 I
Cucsa.098110 Cucumis sativus Cucsa.098110 I
Cucsa.197320 Cucumis sativus Cucsa.197320 I
Cucsa.285620 Cucumis sativus Cucsa.285620 I
Cucsa.361050 Cucumis sativus Cucsa.361050 I
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I
Eucgr.C03026 Eucalyptus grandis Eucgr.C03026 I
Eucgr.D00726 Eucalyptus grandis Eucgr.D00726 I
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I
evm.TU.supercontig_13.246 Carica papaya evm.TU.supercontig_13.246 I
evm.TU.supercontig_13.248 Carica papaya evm.TU.supercontig_13.248 I
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I
F775_07352 Aegilops tauschii F775_07352 I
F775_27786 Aegilops tauschii F775_27786 I
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D
fgenesh2_kg.1__2077__AT1G19000.2 Arabidopsis lyrata fgenesh2_kg.1__2077__AT1G19000.2 I
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I
fgenesh2_kg.2__1750__AT1G74840.1 Arabidopsis lyrata fgenesh2_kg.2__1750__AT1G74840.1 I
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I
gene11419-v1.0-hybrid Fragaria vesca gene11419-v1.0-hybrid I
gene21159-v1.0-hybrid Fragaria vesca gene21159-v1.0-hybrid I
GLYMA01G04530 Glycine max GLYMA01G04530 I
GLYMA02G03020 Glycine max GLYMA02G03020 I
GLYMA04G34720 Glycine max GLYMA04G34720 I
GLYMA05G01640 Glycine max GLYMA05G01640 I
GLYMA05G36290 Glycine max GLYMA05G36290 I
GLYMA06G19960 Glycine max GLYMA06G19960 I
GLYMA08G03330 Glycine max GLYMA08G03330 I
GLYMA08G40460 Glycine max GLYMA08G40460 I
GLYMA14G10740 Glycine max GLYMA14G10740 I
GLYMA17G10250 Glycine max GLYMA17G10250 I
Gorai.006G274300 Gossypium raimondii Gorai.006G274300 I
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I
Gorai.009G030900 Gossypium raimondii Gorai.009G030900 I
Gorai.010G081800 Gossypium raimondii Gorai.010G081800 I
GRMZM2G088524 Zea mays GRMZM2G088524 I
GRMZM2G157306 Zea mays GRMZM2G157306 I
GSMUA_Achr5G09240_001 Musa acuminata GSMUA_Achr5G09240_001 I
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I
LjB09A03.30.nc Lotus japonicus LjB09A03.30.nc I
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I
LPERR01G05630 Leersia perrieri LPERR01G05630 I
LPERR08G02800 Leersia perrieri LPERR08G02800 I
LPERR08G03010 Leersia perrieri LPERR08G03010 I
LPERR10G14440 Leersia perrieri LPERR10G14440 I
Lus10004248.g Linum usitatissimum Lus10004248.g I
Lus10013289.g Linum usitatissimum Lus10013289.g I
Lus10027781.g Linum usitatissimum Lus10027781.g I
Lus10030813.g Linum usitatissimum Lus10030813.g I
Lus10036652.g Linum usitatissimum Lus10036652.g I
MDP0000162533 Malus domestica MDP0000162533 I
MDP0000230601 Malus domestica MDP0000230601 I
MDP0000297148 Malus domestica MDP0000297148 I
MDP0000537549 Malus domestica MDP0000537549 I
MDP0000875621 Malus domestica MDP0000875621 I
mgf003276m Mimulus guttatus mgf003276m I
mgf011892m Mimulus guttatus mgf011892m I
mgf023843m Mimulus guttatus mgf023843m I
MLOC_10280 Hordeum vulgare MLOC_10280 I
MLOC_20277 Hordeum vulgare MLOC_20277 I
MLOC_73122 Hordeum vulgare MLOC_73122 I
MLOC_79329 Hordeum vulgare MLOC_79329 I
MTR_4g015130 Medicago truncatula MTR_4g015130 I
MTR_4g107230 Medicago truncatula MTR_4g107230 I
MTR_5g037080 Medicago truncatula MTR_5g037080 I
MTR_6g092540 Medicago truncatula MTR_6g092540 I
MTR_8g101650 Medicago truncatula MTR_8g101650 I
OB01G15870 Oryza brachyantha OB01G15870 I
OB08G13080 Oryza brachyantha OB08G13080 I
OB10G25700 Oryza brachyantha OB10G25700 I
OBART01G05900 Oryza barthii OBART01G05900 I
OBART08G02720 Oryza barthii OBART08G02720 I
OBART08G03010 Oryza barthii OBART08G03010 I
OBART10G18600 Oryza barthii OBART10G18600 I
OGLUM01G06460 Oryza glumaepatula OGLUM01G06460 I
OGLUM08G02800 Oryza glumaepatula OGLUM08G02800 I
OGLUM08G03020 Oryza glumaepatula OGLUM08G03020 I
OGLUM10G18690 Oryza glumaepatula OGLUM10G18690 I
OLONG_008716 Oryza longistaminata OLONG_008716 I
OLONG_008990 Oryza longistaminata OLONG_008990 I
OMERI01G06100 Oryza meridionalis OMERI01G06100 I
OMERI08G00360 Oryza meridionalis OMERI08G00360 I
OMERI08G02700 Oryza meridionalis OMERI08G02700 I
ONIVA01G06840 Oryza nivara ONIVA01G06840 I
ONIVA06G02390 Oryza nivara ONIVA06G02390 I
ONIVA08G02810 Oryza nivara ONIVA08G02810 I
ONIVA10G21110 Oryza nivara ONIVA10G21110 I
OPUNC01G05740 Oryza punctata OPUNC01G05740 I
OPUNC08G02520 Oryza punctata OPUNC08G02520 I
OPUNC08G02750 Oryza punctata OPUNC08G02750 I
OPUNC10G16980 Oryza punctata OPUNC10G16980 I
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I
orange1.1g047042m.g Citrus sinensis orange1.1g047042m.g I
orange1.1g048263m.g Citrus sinensis orange1.1g048263m.g I
ORGLA01G0055800 Oryza glaberrima ORGLA01G0055800 I
ORGLA08G0021900 Oryza glaberrima ORGLA08G0021900 I
ORGLA08G0023800 Oryza glaberrima ORGLA08G0023800 I
ORGLA10G0137400 Oryza glaberrima ORGLA10G0137400 I
ORUFI01G06450 Oryza rufipogon ORUFI01G06450 I
ORUFI05G06600 Oryza rufipogon ORUFI05G06600 I
ORUFI08G03000 Oryza rufipogon ORUFI08G03000 I
ORUFI08G03370 Oryza rufipogon ORUFI08G03370 I
ORUFI10G19790 Oryza rufipogon ORUFI10G19790 I
OS01G0192300 Oryza sativa OS01G0192300 I
OS05G0195700 Oryza sativa OS05G0195700 I
OS08G0144000 Oryza sativa OS08G0144000 I
OS08G0151000 Oryza sativa OS08G0151000 I
MYBS2 Oryza sativa OS10G0562100 I
Pavir.Fa01954 Panicum virgatum Pavir.Fa01954 I
Pavir.Hb00090 Panicum virgatum Pavir.Hb00090 I
Pavir.Ib02262 Panicum virgatum Pavir.Ib02262 I
Pavir.J25346 Panicum virgatum Pavir.J25346 I
PDK_20s1532501g001 Phoenix dactylifera PDK_20s1532501g001 I
PGSC0003DMG400000340 Solanum tuberosum PGSC0003DMG400000340 I
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I
PK17526.1 Cannabis sativa PK17526.1 D
Pm019550 Prunus mume Pm019550 I
Pm024648 Prunus mume Pm024648 I
Pm027228 Prunus mume Pm027228 I
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I
POPTR_0012s07560 Populus trichocarpa POPTR_0012s07560 I
POPTR_0015s08020 Populus trichocarpa POPTR_0015s08020 I
PRUPE_ppa008425mg Prunus persica PRUPE_ppa008425mg I
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I
PRUPE_ppa010092mg Prunus persica PRUPE_ppa010092mg I
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I
SapurV1A.0086s0190 Salix purpurea SapurV1A.0086s0190 I
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I
SapurV1A.0138s0010 Salix purpurea SapurV1A.0138s0010 I
SapurV1A.0161s0200 Salix purpurea SapurV1A.0161s0200 I
SapurV1A.1274s0030 Salix purpurea SapurV1A.1274s0030 I
SapurV1A.1673s0010 Salix purpurea SapurV1A.1673s0010 I
Sb01g028870 Sorghum bicolor Sb01g028870 I
Sb03g006450 Sorghum bicolor Sb03g006450 I
Sb07g003170 Sorghum bicolor Sb07g003170 I
Sb07g003330 Sorghum bicolor Sb07g003330 I
scaffold_800056.1 Arabidopsis lyrata scaffold_800056.1 I
SELMODRAFT_130556 Selaginella moellendorffii SELMODRAFT_130556 I
SELMODRAFT_131017 Selaginella moellendorffii SELMODRAFT_131017 I
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I
Si013948m.g Setaria italica Si013948m.g I
Si014031m.g Setaria italica Si014031m.g I
Si036966m.g Setaria italica Si036966m.g I
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I
Solyc12g008800.1 Solanum lycopersicum Solyc12g008800.1 I
TCM_010118 Theobroma cacao TCM_010118 I
TCM_013524 Theobroma cacao TCM_013524 I
TCM_014838 Theobroma cacao TCM_014838 I
TCM_037276 Theobroma cacao TCM_037276 I
TCM_037687 Theobroma cacao TCM_037687 I
Thhalv10000932m.g Eutrema salsugineum Thhalv10000932m.g I
Thhalv10005259m.g Eutrema salsugineum Thhalv10005259m.g I
Thhalv10008346m.g Eutrema salsugineum Thhalv10008346m.g I
Thhalv10018822m.g Eutrema salsugineum Thhalv10018822m.g I
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I
Thhalv10025432m.g Eutrema salsugineum Thhalv10025432m.g I
Traes_1AL_F7D2C31DB Triticum aestivum Traes_1AL_F7D2C31DB I
Traes_1BL_F809FA27D Triticum aestivum Traes_1BL_F809FA27D I
Traes_1DL_6506152C8 Triticum aestivum Traes_1DL_6506152C8 I
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I
Traes_7AL_9E45828B0 Triticum aestivum Traes_7AL_9E45828B0 I
Traes_7BL_C184D0525 Triticum aestivum Traes_7BL_C184D0525 I
Traes_7DL_6B4FA59C6 Triticum aestivum Traes_7DL_6B4FA59C6 I
TRIUR3_24105 Triticum urartu TRIUR3_24105 I
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I