Ciclev10006714m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10006714m.g T286514_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.685 0.745
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.685 0.745
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.685 0.745
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.674 0.723
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.674 0.723
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.674 0.723
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.672 0.745
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.672 0.723
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.662 0.723
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.662 0.723
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.662 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006714m Myb 72 119

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g044137m.g Citrus sinensis orange1.1g044137m.g I 0.909
F775_27786 Aegilops tauschii F775_27786 I 0.729
LPERR10G14440 Leersia perrieri LPERR10G14440 I 0.729
MLOC_10280 Hordeum vulgare MLOC_10280 I 0.729
OB10G25700 Oryza brachyantha OB10G25700 I 0.729
OPUNC10G16980 Oryza punctata OPUNC10G16980 I 0.729
Traes_1AL_F7D2C31DB Triticum aestivum Traes_1AL_F7D2C31DB I 0.729
Traes_1BL_F809FA27D Triticum aestivum Traes_1BL_F809FA27D I 0.729
Traes_1DL_6506152C8 Triticum aestivum Traes_1DL_6506152C8 I 0.729
BGIOSGA031396 Oryza indica BGIOSGA031396 I 0.718
MYBS2 Oryza indica BGIOSGA031397 I 0.718
OBART10G18600 Oryza barthii OBART10G18600 I 0.718
OGLUM10G18690 Oryza glumaepatula OGLUM10G18690 I 0.718
OLONG_008990 Oryza longistaminata OLONG_008990 I 0.718
OMERI08G00360 Oryza meridionalis OMERI08G00360 I 0.718
ONIVA10G21110 Oryza nivara ONIVA10G21110 I 0.718
ORGLA10G0137400 Oryza glaberrima ORGLA10G0137400 I 0.718
ORUFI10G19790 Oryza rufipogon ORUFI10G19790 I 0.718
MYBS2 Oryza sativa OS10G0562100 I 0.718
SapurV1A.0138s0010 Salix purpurea SapurV1A.0138s0010 I 0.714
SapurV1A.1673s0010 Salix purpurea SapurV1A.1673s0010 I 0.714
GRMZM2G088524 Zea mays GRMZM2G088524 I 0.711
MTR_6g092540 Medicago truncatula MTR_6g092540 I 0.711
Sb01g028870 Sorghum bicolor Sb01g028870 I 0.711
Si036966m.g Setaria italica Si036966m.g I 0.711
Ca_15538 Cicer arietinum Ca_15538 I 0.711
Pavir.Ib02262 Panicum virgatum Pavir.Ib02262 I 0.711
BGIOSGA002215 Oryza indica BGIOSGA002215 I 0.703
LPERR01G05630 Leersia perrieri LPERR01G05630 I 0.703
OB01G15870 Oryza brachyantha OB01G15870 I 0.703
OBART01G05900 Oryza barthii OBART01G05900 I 0.703
OGLUM01G06460 Oryza glumaepatula OGLUM01G06460 I 0.703
OLONG_008716 Oryza longistaminata OLONG_008716 I 0.703
OMERI01G06100 Oryza meridionalis OMERI01G06100 I 0.703
ONIVA01G06840 Oryza nivara ONIVA01G06840 I 0.703
OPUNC01G05740 Oryza punctata OPUNC01G05740 I 0.703
ORGLA01G0055800 Oryza glaberrima ORGLA01G0055800 I 0.703
ORUFI01G06450 Oryza rufipogon ORUFI01G06450 I 0.703
OS01G0192300 Oryza sativa OS01G0192300 I 0.703
BRADI3G33440 Brachypodium distachyon BRADI3G33440 I 0.696
Bra015890 Brassica rapa Bra015890 I 0.693
Ciclev10006771m.g Citrus clementina Ciclev10006771m.g I 0.693
orange1.1g048263m.g Citrus sinensis orange1.1g048263m.g I 0.693
Pavir.Hb00090 Panicum virgatum Pavir.Hb00090 I 0.691
AT1G74840 Arabidopsis thaliana AT1G74840 D 0.685
Bo6g119010 Brassica oleracea Bo6g119010 I 0.682
Cagra.0402s0045 Capsella grandiflora Cagra.0402s0045 I 0.682
Cagra.1961s0096 Capsella grandiflora Cagra.1961s0096 I 0.682
Carubv10011841m.g Capsella rubella Carubv10011841m.g I 0.682
Carubv10020668m.g Capsella rubella Carubv10020668m.g I 0.682
evm.TU.supercontig_13.246 Carica papaya evm.TU.supercontig_13.246 I 0.682
evm.TU.supercontig_13.248 Carica papaya evm.TU.supercontig_13.248 I 0.682
Thhalv10018822m.g Eutrema salsugineum Thhalv10018822m.g I 0.682
BGIOSGA027987 Oryza indica BGIOSGA027987 I 0.680
LPERR08G03010 Leersia perrieri LPERR08G03010 I 0.680
OB08G13080 Oryza brachyantha OB08G13080 I 0.680
OBART08G03010 Oryza barthii OBART08G03010 I 0.680
OGLUM08G03020 Oryza glumaepatula OGLUM08G03020 I 0.680
ONIVA06G02390 Oryza nivara ONIVA06G02390 I 0.680
OPUNC08G02750 Oryza punctata OPUNC08G02750 I 0.680
ORGLA08G0023800 Oryza glaberrima ORGLA08G0023800 I 0.680
ORUFI08G03370 Oryza rufipogon ORUFI08G03370 I 0.680
OS08G0151000 Oryza sativa OS08G0151000 I 0.680
Cla010879 Citrullus lanatus Cla010879 I 0.680
29912.m005387 Ricinus communis 29912.m005387 I 0.680
30147.m014337 Ricinus communis 30147.m014337 I 0.680
cassava18869.valid.m1 Manihot esculenta cassava18869.valid.m1 I 0.680
Cucsa.094040 Cucumis sativus Cucsa.094040 I 0.680
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I 0.680
Aquca_001_00103 Aquilegia coerulea Aquca_001_00103 I 0.680
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I 0.680
Gorai.009G030900 Gossypium raimondii Gorai.009G030900 I 0.680
chr4.CM0004.450.nd Lotus japonicus chr4.CM0004.450.nd I 0.680
LjB09A03.30.nc Lotus japonicus LjB09A03.30.nc I 0.680
MTR_4g015130 Medicago truncatula MTR_4g015130 I 0.677
AT1G19000 Arabidopsis thaliana AT1G19000 D 0.674
fgenesh2_kg.1__2077__AT1G19000.2 Arabidopsis lyrata fgenesh2_kg.1__2077__AT1G19000.2 I 0.674
fgenesh2_kg.2__1750__AT1G74840.1 Arabidopsis lyrata fgenesh2_kg.2__1750__AT1G74840.1 I 0.674
Bostr.3288s0130 Boechera stricta Bostr.3288s0130 I 0.674
Bostr.7128s0505 Boechera stricta Bostr.7128s0505 I 0.674
Thhalv10008346m.g Eutrema salsugineum Thhalv10008346m.g I 0.674
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I 0.672
AT1G70000 Arabidopsis thaliana AT1G70000 I 0.672
BGIOSGA018651 Oryza indica BGIOSGA018651 I 0.672
Bo2g066810 Brassica oleracea Bo2g066810 I 0.672
Bo6g094990 Brassica oleracea Bo6g094990 I 0.672
Bra003969 Brassica rapa Bra003969 I 0.672
Bra007892 Brassica rapa Bra007892 I 0.672
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I 0.672
GLYMA01G04530 Glycine max GLYMA01G04530 I 0.672
GLYMA02G03020 Glycine max GLYMA02G03020 I 0.672
GLYMA05G36290 Glycine max GLYMA05G36290 I 0.672
GLYMA08G03330 Glycine max GLYMA08G03330 I 0.672
GLYMA08G40460 Glycine max GLYMA08G40460 I 0.672
GSMUA_Achr5G09240_001 Musa acuminata GSMUA_Achr5G09240_001 I 0.672
MLOC_20277 Hordeum vulgare MLOC_20277 I 0.672
MLOC_79329 Hordeum vulgare MLOC_79329 I 0.672
MTR_5g037080 Medicago truncatula MTR_5g037080 I 0.672
ORUFI05G06600 Oryza rufipogon ORUFI05G06600 I 0.672
OS05G0195700 Oryza sativa OS05G0195700 I 0.672
PGSC0003DMG400000340 Solanum tuberosum PGSC0003DMG400000340 I 0.672
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I 0.672
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I 0.672
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I 0.672
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I 0.672
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I 0.672
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I 0.672
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I 0.672
Sb03g006450 Sorghum bicolor Sb03g006450 I 0.672
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I 0.672
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I 0.672
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I 0.672
Solyc12g008800.1 Solanum lycopersicum Solyc12g008800.1 I 0.672
TCM_010118 Theobroma cacao TCM_010118 I 0.672
TCM_013524 Theobroma cacao TCM_013524 I 0.672
TCM_037276 Theobroma cacao TCM_037276 I 0.672
TCM_037687 Theobroma cacao TCM_037687 I 0.672
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I 0.672
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I 0.672
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I 0.672
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I 0.672
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I 0.672
Ca_05889 Cicer arietinum Ca_05889 I 0.672
Ca_17597 Cicer arietinum Ca_17597 I 0.672
Cla000916 Citrullus lanatus Cla000916 I 0.672
Cla010296 Citrullus lanatus Cla010296 I 0.672
Cla019445 Citrullus lanatus Cla019445 I 0.672
Pm024648 Prunus mume Pm024648 I 0.672
29736.m002089 Ricinus communis 29736.m002089 I 0.672
30147.m014028 Ricinus communis 30147.m014028 I 0.672
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I 0.672
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I 0.672
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I 0.672
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I 0.672
Cucsa.098110 Cucumis sativus Cucsa.098110 I 0.672
Cucsa.197320 Cucumis sativus Cucsa.197320 I 0.672
Cucsa.285620 Cucumis sativus Cucsa.285620 I 0.672
Cucsa.361050 Cucumis sativus Cucsa.361050 I 0.672
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I 0.672
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I 0.672
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I 0.672
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D 0.672
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I 0.672
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I 0.672
Ciclev10009128m.g Citrus clementina Ciclev10009128m.g I 0.672
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I 0.672
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I 0.672
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I 0.672
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I 0.672
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I 0.672
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I 0.672
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I 0.672
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.672
Gorai.010G081800 Gossypium raimondii Gorai.010G081800 I 0.672
Lus10004248.g Linum usitatissimum Lus10004248.g I 0.672
Lus10013289.g Linum usitatissimum Lus10013289.g I 0.672
Lus10027781.g Linum usitatissimum Lus10027781.g I 0.672
Lus10030813.g Linum usitatissimum Lus10030813.g I 0.672
Lus10036652.g Linum usitatissimum Lus10036652.g I 0.672
MDP0000230601 Malus domestica MDP0000230601 I 0.672
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I 0.672
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I 0.672
orange1.1g047042m.g Citrus sinensis orange1.1g047042m.g I 0.672
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I 0.672
SapurV1A.0086s0190 Salix purpurea SapurV1A.0086s0190 I 0.672
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I 0.672
SapurV1A.1274s0030 Salix purpurea SapurV1A.1274s0030 I 0.672
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I 0.672
PK17526.1 Cannabis sativa PK17526.1 D 0.672
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I 0.672
PDK_20s1532501g001 Phoenix dactylifera PDK_20s1532501g001 I 0.672
Bo7g098880 Brassica oleracea Bo7g098880 I 0.670
BRADI3G17170 Brachypodium distachyon BRADI3G17170 I 0.670
F775_07352 Aegilops tauschii F775_07352 I 0.670
GLYMA05G01640 Glycine max GLYMA05G01640 I 0.670
GLYMA17G10250 Glycine max GLYMA17G10250 I 0.670
GRMZM2G157306 Zea mays GRMZM2G157306 I 0.670
MLOC_73122 Hordeum vulgare MLOC_73122 I 0.670
Sb07g003330 Sorghum bicolor Sb07g003330 I 0.670
SELMODRAFT_130556 Selaginella moellendorffii SELMODRAFT_130556 I 0.670
SELMODRAFT_131017 Selaginella moellendorffii SELMODRAFT_131017 I 0.670
Si014031m.g Setaria italica Si014031m.g I 0.670
Traes_7AL_9E45828B0 Triticum aestivum Traes_7AL_9E45828B0 I 0.670
Traes_7BL_C184D0525 Triticum aestivum Traes_7BL_C184D0525 I 0.670
Traes_7DL_6B4FA59C6 Triticum aestivum Traes_7DL_6B4FA59C6 I 0.670
TRIUR3_24105 Triticum urartu TRIUR3_24105 I 0.670
Pavir.Fa01954 Panicum virgatum Pavir.Fa01954 I 0.670
BGIOSGA027973 Oryza indica BGIOSGA027973 I 0.669
LPERR08G02800 Leersia perrieri LPERR08G02800 I 0.669
MTR_8g101650 Medicago truncatula MTR_8g101650 I 0.669
OBART08G02720 Oryza barthii OBART08G02720 I 0.669
OGLUM08G02800 Oryza glumaepatula OGLUM08G02800 I 0.669
OMERI08G02700 Oryza meridionalis OMERI08G02700 I 0.669
ONIVA08G02810 Oryza nivara ONIVA08G02810 I 0.669
OPUNC08G02520 Oryza punctata OPUNC08G02520 I 0.669
ORGLA08G0021900 Oryza glaberrima ORGLA08G0021900 I 0.669
ORUFI08G03000 Oryza rufipogon ORUFI08G03000 I 0.669
OS08G0144000 Oryza sativa OS08G0144000 I 0.669
Sb07g003170 Sorghum bicolor Sb07g003170 I 0.669
Si013948m.g Setaria italica Si013948m.g I 0.669
Pavir.J25346 Panicum virgatum Pavir.J25346 I 0.669
POPTR_0012s07560 Populus trichocarpa POPTR_0012s07560 I 0.665
mgf023843m Mimulus guttatus mgf023843m I 0.665
SapurV1A.0161s0200 Salix purpurea SapurV1A.0161s0200 I 0.665
Thhalv10005259m.g Eutrema salsugineum Thhalv10005259m.g I 0.665
Bo3g019630 Brassica oleracea Bo3g019630 I 0.663
Bra006853 Brassica rapa Bra006853 I 0.663
GLYMA14G10740 Glycine max GLYMA14G10740 I 0.663
POPTR_0015s08020 Populus trichocarpa POPTR_0015s08020 I 0.663
KUA1 Arabidopsis thaliana AT5G47390 D 0.662
Bo2g132340 Brassica oleracea Bo2g132340 I 0.662
Bo2g161470 Brassica oleracea Bo2g161470 I 0.662
Bo7g105100 Brassica oleracea Bo7g105100 I 0.662
Bra012665 Brassica rapa Bra012665 I 0.662
Bra022127 Brassica rapa Bra022127 I 0.662
Bra029320 Brassica rapa Bra029320 I 0.662
GLYMA04G34720 Glycine max GLYMA04G34720 I 0.662
GLYMA06G19960 Glycine max GLYMA06G19960 I 0.662
MTR_4g107230 Medicago truncatula MTR_4g107230 I 0.662
PRUPE_ppa008425mg Prunus persica PRUPE_ppa008425mg I 0.662
PRUPE_ppa010092mg Prunus persica PRUPE_ppa010092mg I 0.662
scaffold_800056.1 Arabidopsis lyrata scaffold_800056.1 I 0.662
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I 0.662
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I 0.662
TCM_014838 Theobroma cacao TCM_014838 I 0.662
Pm019550 Prunus mume Pm019550 I 0.662
Pm027228 Prunus mume Pm027228 I 0.662
cassava29981.valid.m1 Manihot esculenta cassava29981.valid.m1 I 0.662
cassava43855.valid.m1 Manihot esculenta cassava43855.valid.m1 I 0.662
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I 0.662
mgf003276m Mimulus guttatus mgf003276m I 0.662
mgf011892m Mimulus guttatus mgf011892m I 0.662
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I 0.662
Bostr.14419s0032 Boechera stricta Bostr.14419s0032 I 0.662
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I 0.662
Cagra.1415s0002 Capsella grandiflora Cagra.1415s0002 I 0.662
Carubv10020813m.g Capsella rubella Carubv10020813m.g I 0.662
Carubv10026634m.g Capsella rubella Carubv10026634m.g I 0.662
Eucgr.C03026 Eucalyptus grandis Eucgr.C03026 I 0.662
Eucgr.D00726 Eucalyptus grandis Eucgr.D00726 I 0.662
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I 0.662
gene11419-v1.0-hybrid Fragaria vesca gene11419-v1.0-hybrid I 0.662
gene21159-v1.0-hybrid Fragaria vesca gene21159-v1.0-hybrid I 0.662
Gorai.006G274300 Gossypium raimondii Gorai.006G274300 I 0.662
MDP0000162533 Malus domestica MDP0000162533 I 0.662
MDP0000297148 Malus domestica MDP0000297148 I 0.662
MDP0000537549 Malus domestica MDP0000537549 I 0.662
MDP0000875621 Malus domestica MDP0000875621 I 0.662
Thhalv10000932m.g Eutrema salsugineum Thhalv10000932m.g I 0.662
Thhalv10025432m.g Eutrema salsugineum Thhalv10025432m.g I 0.662
chr2.CM0373.230.nd Lotus japonicus chr2.CM0373.230.nd I 0.662
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I 0.662
Ca_17598 Cicer arietinum Ca_17598 I 0.661