CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Scas_Contig707.46 *(Saccharomyces castellii)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Scas_Contig707.46	T144970_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CMR3 M00042_2.00	Saccharomyces cerevisiae	HGTARATCN	NGATYTACD	PBM Badis et al.(2008) YPR013C_2104	0.792	0.913
CMR3 M01539_2.00	Saccharomyces cerevisiae	NGATYDRCVN	NBGYHRATCN	PBM Zhu et al.(2009) Ypr013c	0.792	0.913
CMR3 M07471_2.00	Saccharomyces cerevisiae	NGATYKRCR	YGYMRATCN	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0434.1	0.792	0.913
CMR3 M08545_2.00	Saccharomyces cerevisiae	NNNRVYGTARATCMYDNNNN	NNNNHRKGATYTACRBYNNN	Misc DeBoer et al.(2011) YPR013C_859	0.792	0.913
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Scas_Contig707.46	C2H2 ZF	270	292	KQCPVCGKICSRPSTLKTHYLIH
Scas_Contig707.46	C2H2 ZF	298	322	FRCPWKSCNKSFNVKSNMLRHLKSH

Links
Other C2H2 ZF family TFs
Other *Saccharomyces castellii* TFs