CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf740
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-1219010
T145391_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN
NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.803
0.838
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN
NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.803
0.838
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH
DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.803
0.838
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY
RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.787
0.824
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY
RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.787
0.824
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.787
0.824
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC
GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.787
0.824
ZNF740
M10221_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.787
0.824
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY
RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.787
0.824
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.787
0.824
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH76952
C2H2 ZF
99
121
YICEHCYGAFRSSYHLKRHQYIH
AAH76952
C2H2 ZF
127
149
YECDMCEMKFIQKYHLDRHKRVH
AAH76952
C2H2 ZF
155
176
YQCERCQQAFSRTDRLLRHKRM
XP_002936682
C2H2 ZF
124
146
YICEHCYGAFRSSYHLKRHQYIH
XP_002936682
C2H2 ZF
152
174
YECDMCEMKFIQKYHLDRHKRVH
XP_002936682
C2H2 ZF
180
201
YQCERCQQAFSRTDRLLRHKRM
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001391.4
Alligator sinensis
Alligator_sinensis_CCG001391.4
I
MAZ
Anolis carolinensis
ENSACAG00000014698
I
ENSAMEG00000014864
Ailuropoda melanoleuca
ENSAMEG00000014864
I
ENSBTAP00000026016-D1
Bos grunniens
ENSBTAP00000026016-D1
I
MAZ
Cavia porcellus
ENSCPOG00000019886
I
ENSECAG00000024341
Equus caballus
ENSECAG00000024341
I
MAZ
Homo sapiens
ENSG00000103495
D
ENSGACG00000014840
Gasterosteus aculeatus
ENSGACG00000014840
I
ENSGMOG00000001761
Gadus morhua
ENSGMOG00000001761
I
Maz
Mus musculus
ENSMUSG00000030678
D
ENSNLEG00000007559
Nomascus leucogenys
ENSNLEG00000007559
I
MAZ
Otolemur garnettii
ENSOGAG00000033940
I
MAZ
Pan troglodytes
ENSPTRG00000007968
I
Maz
Rattus norvegicus
ENSRNOG00000055082
I
ENSSHAG00000009478
Sarcophilus harrisii
ENSSHAG00000009478
I
ENSSTOG00000027842
Ictidomys tridecemlineatus
ENSSTOG00000027842
I
Myotis_brandtii_MAZ_10014461
Myotis brandtii
Myotis_brandtii_MAZ_10014461
I
Pvit_12096
Pogona vitticeps
Pvit_12096
I