sp7.L (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-954333 T145645_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sp7
M09009_2.00 		Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB		 Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A 		0.817 0.957
SP7
M10258_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSX_Q3 		0.817 0.957
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.761 0.855
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.761 0.855
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.761 0.855
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.761 0.855
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.761 0.855
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI46625 C2H2 ZF 291 315
AAI46625 C2H2 ZF 321 345
AAI46625 C2H2 ZF 351 373

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g120870 Brassica oleracea Bo2g120870 N
Bra031820 Brassica rapa Bra031820 N
evm.TU.supercontig_216.26 Carica papaya evm.TU.supercontig_216.26 N
GLYMA01G27910 Glycine max GLYMA01G27910 N
GLYMA10G02501 Glycine max GLYMA10G02501 N
LjSGA_035034.1 Lotus japonicus LjSGA_035034.1 N
LPERR01G37530 Leersia perrieri LPERR01G37530 N
MDP0000501042 Malus domestica MDP0000501042 N
MDP0000844509 Malus domestica MDP0000844509 N
mgf023939m Mimulus guttatus mgf023939m N
OLONG_003514 Oryza longistaminata OLONG_003514 N
OLONG_008057 Oryza longistaminata OLONG_008057 N
OLONG_014599 Oryza longistaminata OLONG_014599 N
OLONG_017398 Oryza longistaminata OLONG_017398 N
OMERI01G40020 Oryza meridionalis OMERI01G40020 N
Pavir.Ib03390 Panicum virgatum Pavir.Ib03390 N
PDK_20s1331901g003 Phoenix dactylifera PDK_20s1331901g003 N
SELMODRAFT_9104 Selaginella moellendorffii SELMODRAFT_9104 N
SELMODRAFT_9108 Selaginella moellendorffii SELMODRAFT_9108 N
SELMODRAFT_9114 Selaginella moellendorffii SELMODRAFT_9114 N
TRAES3BF231500020CFD_g Triticum aestivum TRAES3BF231500020CFD_g N
Traes_4BL_C7F1E5ECA Triticum aestivum Traes_4BL_C7F1E5ECA N
TRIUR3_22849 Triticum urartu TRIUR3_22849 N
TRIUR3_34542 Triticum urartu TRIUR3_34542 N