11988_Multiple (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 11988_Multiple T145914_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAP1
M08416_2.00 		Saccharomyces cerevisiae
ACCYTMARGGTBRTG
CAYVACCYTKARGGT		 ChIP-chip
Mathelier et al.(2014)
MA0440.1 		0.768 0.898
ZAP1
M08531_2.00 		Saccharomyces cerevisiae
ACCCTMAAGGT
ACCTTKAGGGT		 Misc
DeBoer et al.(2011)
YJL056C_469 		0.768 0.898
ZAP1
M10396_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ZAP1_01 		0.768 0.898
ZAP1
M10397_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ZAP1_Q6_01 		0.768 0.898
ZAP1
M10398_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ZAP1_Q6 		0.768 0.898
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
11988_Multiple C2H2 ZF 392 417
11988_Multiple C2H2 ZF 425 449
11988_Multiple C2H2 ZF 455 477
11988_Multiple C2H2 ZF 483 505
11988_Multiple C2H2 ZF 511 533
11988_Multiple C2H2 ZF 537 558

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm4231 Brugia malayi Bm4231 N
CBN17931 Caenorhabditis brenneri CBN17931 N
GPUH_0001162601 Gongylonema pulchrum GPUH_0001162601 N
HDID_0000845101 Hymenolepis diminuta HDID_0000845101 N
L596_g5643 Steinernema carpocapsae L596_g5643 N
L889_g32974 Steinernema feltiae L889_g32974 N
nAv.1.0.1.g00189 Acanthocheilonema viteae nAv.1.0.1.g00189 N
nLs.2.1.2.g05929 Litomosoides sigmodontis nLs.2.1.2.g05929 N
nOo.2.0.1.g01120 Onchocerca ochengi nOo.2.0.1.g01120 N
OFLC_0001387901 Onchocerca flexuosa OFLC_0001387901 N
PXEA_0003384801 Protopolystoma xenopodis PXEA_0003384801 N
RSKR_0000785950 Rhabditophanes kr3021 RSKR_0000785950 N
SBAD_0000046801 Soboliphyme baturini SBAD_0000046801 N
SPAL_0000766800 Strongyloides papillosus SPAL_0000766800 N
SSTP_0001239300 Strongyloides stercoralis SSTP_0001239300 N
SVE_0136400 Strongyloides venezuelensis SVE_0136400 N
TCLT_0000442401 Thelazia callipaeda TCLT_0000442401 N