CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g05929
(
Litomosoides sigmodontis
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05485 (THAP)
IPR006612
nLs.2.1.2.g05929
T350094_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t05929-RA
THAP finger
15
77
TCGFPNCKFRSRYRGQEDNRHFYRIPKRPQVLRQRWLLAIGRTEDTVVSQVRMHPLYCFLCRC
Links
Other
THAP finger
family TFs
Other
Litomosoides sigmodontis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm4231
Brugia malayi
Bm4231
N
0.911
nAv.1.0.1.g00189
Acanthocheilonema viteae
nAv.1.0.1.g00189
N
0.911
WUBG_11327
Wuchereria bancrofti
WUBG_11327
N
0.893
OFLC_0001387901
Onchocerca flexuosa
OFLC_0001387901
N
0.887
TCLT_0000442401
Thelazia callipaeda
TCLT_0000442401
N
0.877
nOo.2.0.1.g01120
Onchocerca ochengi
nOo.2.0.1.g01120
N
0.870
WBGene00242032
Onchocerca volvulus
WBGene00242032
N
0.857
nDi.2.2.2.g03612
Dirofilaria immitis
nDi.2.2.2.g03612
N
0.857
SVUK_0001082501
Strongylus vulgaris
SVUK_0001082501
N
0.857
LOAG_02009
Loa loa
LOAG_02009
N
0.839
ANCCEY_01551
Ancylostoma ceylanicum
ANCCEY_01551
N
0.839
ANCDUO_22594
Ancylostoma duodenale
ANCDUO_22594
N
0.839
CGOC_0000225401
Cylicostephanus goldi
CGOC_0000225401
N
0.839
DICVIV_08199
Dictyocaulus viviparus
DICVIV_08199
N
0.839
GPUH_0001162601
Gongylonema pulchrum
GPUH_0001162601
N
0.839
HCOI02172800
Haemonchus contortus
HCOI02172800
N
0.839
HPBE_0000579401
Heligmosomoides bakeri
HPBE_0000579401
N
0.839
HPLM_0001137501
Haemonchus placei
HPLM_0001137501
N
0.839
NBR_0000688101
Nippostrongylus brasiliensis
NBR_0000688101
N
0.839
NECAME_01802
Necator americanus
NECAME_01802
N
0.839
OESDEN_00032
Oesophagostomum dentatum
OESDEN_00032
N
0.839
CBN17931
Caenorhabditis brenneri
CBN17931
N
0.830
PTRK_0000436200
Parastrongyloides trichosuri
PTRK_0000436200
N
0.821
SPAL_0000766800
Strongyloides papillosus
SPAL_0000766800
N
0.821
SSTP_0001239300
Strongyloides stercoralis
SSTP_0001239300
N
0.821
CJA39536
Caenorhabditis japonica
CJA39536
N
0.768
Ppa-ctbp-1
Pristionchus pacificus
PPA19590
N
0.768
scaffold16-EXSNAP2012.158
Pristionchus exspectatus
scaffold16-EXSNAP2012.158
N
0.768
HDID_0000845101
Hymenolepis diminuta
HDID_0000845101
N
0.766
CRE00690
Caenorhabditis remanei
CRE00690
N
0.714
nRc.2.0.1.g38526
Romanomermis culicivorax
nRc.2.0.1.g38526
N
0.714