CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g38526
(
Romanomermis culicivorax
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05485 (THAP)
IPR006612
nRc.2.0.1.g38526
T350098_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t38526-RA
THAP finger
61
203
TCGFPNCKFRSRYRGQEDNRHFYRIPKRPAVLRQKWLEAIGRTEATVVSQLRICSGHFSGGEKKDGDIPVPDPEIDTPLCIELPPKEPKGDRKRLKMSVLSPGNMRNNSRSLLSPNHHFGKHVTNNNNSTIRSSLTPTSYPRG
Links
Other
THAP finger
family TFs
Other
Romanomermis culicivorax
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001627501
Diphyllobothrium latum
DILT_0001627501
N
0.841
SPER_0000064801
Spirometra erinaceieuropaei
SPER_0000064801
N
0.841
SSTP_0001239300
Strongyloides stercoralis
SSTP_0001239300
N
0.841
SPU_007622
Strongylocentrotus purpuratus
SPU_007622
N
0.812
SBAD_0000046801
Soboliphyme baturini
SBAD_0000046801
N
0.811
Ppa-ctbp-1
Pristionchus pacificus
PPA19590
N
0.797
HDID_0000845101
Hymenolepis diminuta
HDID_0000845101
N
0.787
PXEA_0003384801
Protopolystoma xenopodis
PXEA_0003384801
N
0.759
CRE00690
Caenorhabditis remanei
CRE00690
N
0.739
CBN17931
Caenorhabditis brenneri
CBN17931
N
0.736
OFLC_0001387901
Onchocerca flexuosa
OFLC_0001387901
N
0.736
nOo.2.0.1.g01120
Onchocerca ochengi
nOo.2.0.1.g01120
N
0.722
TCLT_0000442401
Thelazia callipaeda
TCLT_0000442401
N
0.719
nLs.2.1.2.g05929
Litomosoides sigmodontis
nLs.2.1.2.g05929
N
0.714
MCOS_0000280601
Mesocestoides corti
MCOS_0000280601
N
0.710
Bm4231
Brugia malayi
Bm4231
N
0.702