CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_40332
(
Cryphonectria parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pm.C_40332
T146165_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
csp-1
M01876_2.00
Neurospora crassa
NNDWCCCYDN
NHRGGGWHNN
PBM
Weirauch et al.(2014)
pTH9015
0.757
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_40332
C2H2 ZF
133
157
YPCKDPNCDKSFTTSGHASRHAKIH
estExt_fgenesh1_pm.C_40332
C2H2 ZF
163
187
ISCTFAGCPKRFTRQDNMKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Cryphonectria parasitica
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000671
Anopheles albimanus
AALB000671
N
AARA008607
Anopheles arabiensis
AARA008607
N
AATE019876
Anopheles atroparvus
AATE019876
N
ACHR008175
Anopheles christyi
ACHR008175
N
ACUA016254
Anopheles culicifacies
ACUA016254
N
ADAC003488
Anopheles darlingi
ADAC003488
N
ADIR011324
Anopheles dirus
ADIR011324
N
AFAF001738
Anopheles farauti
AFAF001738
N
AFUN000564
Anopheles funestus
AFUN000564
N
AGAP009066
Anopheles gambiae
AGAP009066
N
AMAM014954
Anopheles maculatus
AMAM014954
N
AMEC016629
Anopheles melas
AMEC016629
N
AMEM004408
Anopheles merus
AMEM004408
N
AMIN009611
Anopheles minimus
AMIN009611
N
AQUA004170
Anopheles quadriannulatus
AQUA004170
N
ASIS014530
Anopheles sinensis
ASIS014530
N
ASTEI07215
Anopheles stephensi
ASTEI07215
N