CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pm.C_40332
(
Cryphonectria parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pm.C_40332
T146165_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
csp-1
M01876_2.00
Neurospora crassa
NNDWCCCYDN
NHRGGGWHNN
PBM
Weirauch et al.(2014)
pTH9015
0.757
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_40332
C2H2 ZF
133
157
YPCKDPNCDKSFTTSGHASRHAKIH
estExt_fgenesh1_pm.C_40332
C2H2 ZF
163
187
ISCTFAGCPKRFTRQDNMKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Cryphonectria parasitica
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGHDH14_bgh03994
Blumeria graminis
BGHDH14_bgh03994
I
0.786
EV44_g6332
Erysiphe necator
EV44_g6332
I
0.781
F503_06973
Ophiostoma piceae uamh
F503_06973
I
0.768
MBM_05919
Marssonina brunnea
MBM_05919
I
0.767
HMPREF1624_02510
Sporothrix schenckii
HMPREF1624_02510
I
0.763
SPBR_03157
Sporothrix brasiliensis
SPBR_03157
I
0.763
ACRE_033800
Acremonium chrysogenum
ACRE_033800
I
0.762
BBA_08074
Beauveria bassiana
BBA_08074
I
0.762
CCM_01106
Cordyceps militaris
CCM_01106
I
0.762
CFIO01_13495
Colletotrichum fioriniae
CFIO01_13495
I
0.762
CGGC5_8350
Colletotrichum gloeosporioides
CGGC5_8350
I
0.762
CH063_10255
Colletotrichum higginsianum
CH063_10255
I
0.762
CSUB01_08762
Colletotrichum sublineola
CSUB01_08762
I
0.762
FFUJ_01494
Fusarium fujikuroi
FFUJ_01494
I
0.762
FGRRES_01298
Fusarium graminearum
FGRRES_01298
I
0.762
FOXG_00087
Fusarium oxysporum
FOXG_00087
I
0.762
FPSE_10955
Fusarium pseudograminearum
FPSE_10955
I
0.762
FVEG_01428
Fusarium verticillioides
FVEG_01428
I
0.762
GGTG_01315
Gaeumannomyces graminis
GGTG_01315
I
0.762
GLRG_03864
Colletotrichum graminicola
GLRG_03864
I
0.762
MAC_07134
Metarhizium acridum
MAC_07134
I
0.762
MAJ_04544
Metarhizium majus
MAJ_04544
I
0.762
MAM_03643
Metarhizium album
MAM_03643
I
0.762
MAM_08466
Metarhizium album
MAM_08466
I
0.762
MANI_013760
Metarhizium anisopliae
MANI_013760
I
0.762
MBR_06044
Metarhizium brunneum
MBR_06044
I
0.762
MGG_13156
Magnaporthe oryzae
MGG_13156
I
0.762
MGU_06432
Metarhizium guizhouense
MGU_06432
I
0.762
NechaG103057
Fusarium solani
NechaG103057
I
0.762
OCS_05033
Ophiocordyceps sinensis
OCS_05033
I
0.762
OIDMADRAFT_28034
Oidiodendron maius
OIDMADRAFT_28034
I
0.762
PFICI_01532
Pestalotiopsis fici
PFICI_01532
I
0.762
S40285_08785
Stachybotrys chlorohalonata
S40285_08785
I
0.762
S40288_07110
Stachybotrys chartarum
S40288_07110
I
0.762
TRIATDRAFT_248464
Trichoderma atroviride
TRIATDRAFT_248464
I
0.762
UV8b_2192
Ustilaginoidea virens
UV8b_2192
I
0.762
VHEMI08901
Torrubiella hemipterigena
VHEMI08901
I
0.762
X797_005806
Metarhizium robertsii
X797_005806
I
0.762
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042
Nectria haematococca
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042
I
0.762
CTHT_0010040
Chaetomium thermophilum
CTHT_0010040
N
0.759
Cob_01739
Colletotrichum orbiculare
Cob_01739
I
0.757
MYCTH_2313746
Myceliophthora thermophila
MYCTH_2313746
I
0.757
NEUTE1DRAFT_119006
Neurospora tetrasperma
NEUTE1DRAFT_119006
I
0.757
PODANS_1_13780
Podospora anserina
PODANS_1_13780
I
0.757
SMAC_04302
Sordaria macrospora
SMAC_04302
I
0.757
TRIREDRAFT_120597
Trichoderma reesei
TRIREDRAFT_120597
I
0.757
TRIVIDRAFT_40853
Trichoderma virens
TRIVIDRAFT_40853
I
0.757
estExt_fgenesh3_kg.C_20464
Neurospora discreta
estExt_fgenesh3_kg.C_20464
I
0.757
csp-1
Neurospora crassa
NCU02713
D
0.757
CPUR_07039
Claviceps purpurea
CPUR_07039
I
0.756