CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_1_chr1_3_00042
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042
T138564_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
csp-1
M01876_2.00
Neurospora crassa
NNDWCCCYDN
NHRGGGWHNN
PBM
Weirauch et al.(2014)
pTH9015
0.798
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042
C2H2 ZF
133
160
YPCRYRDTHGCEKTFTTSGHASRHSKIH
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042
C2H2 ZF
166
190
VQCTFAGCQKKFTRADNMKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_033800
Acremonium chrysogenum
ACRE_033800
I
0.827
BBA_08074
Beauveria bassiana
BBA_08074
I
0.827
CCM_01106
Cordyceps militaris
CCM_01106
I
0.827
CFIO01_13495
Colletotrichum fioriniae
CFIO01_13495
I
0.827
CGGC5_8350
Colletotrichum gloeosporioides
CGGC5_8350
I
0.827
CH063_10255
Colletotrichum higginsianum
CH063_10255
I
0.827
CSUB01_08762
Colletotrichum sublineola
CSUB01_08762
I
0.827
FFUJ_01494
Fusarium fujikuroi
FFUJ_01494
I
0.827
FGRRES_01298
Fusarium graminearum
FGRRES_01298
I
0.827
FOXG_00087
Fusarium oxysporum
FOXG_00087
I
0.827
FPSE_10955
Fusarium pseudograminearum
FPSE_10955
I
0.827
FVEG_01428
Fusarium verticillioides
FVEG_01428
I
0.827
GGTG_01315
Gaeumannomyces graminis
GGTG_01315
I
0.827
GLRG_03864
Colletotrichum graminicola
GLRG_03864
I
0.827
MAC_07134
Metarhizium acridum
MAC_07134
I
0.827
MAJ_04544
Metarhizium majus
MAJ_04544
I
0.827
MAM_03643
Metarhizium album
MAM_03643
I
0.827
MAM_08466
Metarhizium album
MAM_08466
I
0.827
MANI_013760
Metarhizium anisopliae
MANI_013760
I
0.827
MBR_06044
Metarhizium brunneum
MBR_06044
I
0.827
MGG_13156
Magnaporthe oryzae
MGG_13156
I
0.827
MGU_06432
Metarhizium guizhouense
MGU_06432
I
0.827
NechaG103057
Fusarium solani
NechaG103057
I
0.827
OCS_05033
Ophiocordyceps sinensis
OCS_05033
I
0.827
PFICI_01532
Pestalotiopsis fici
PFICI_01532
I
0.827
S40285_08785
Stachybotrys chlorohalonata
S40285_08785
I
0.827
S40288_07110
Stachybotrys chartarum
S40288_07110
I
0.827
TRIATDRAFT_248464
Trichoderma atroviride
TRIATDRAFT_248464
I
0.827
UV8b_2192
Ustilaginoidea virens
UV8b_2192
I
0.827
VHEMI08901
Torrubiella hemipterigena
VHEMI08901
I
0.827
X797_005806
Metarhizium robertsii
X797_005806
I
0.827
Cob_01739
Colletotrichum orbiculare
Cob_01739
I
0.822
CPUR_07039
Claviceps purpurea
CPUR_07039
I
0.821
OIDMADRAFT_28034
Oidiodendron maius
OIDMADRAFT_28034
I
0.803
GMDG_01124
Pseudogymnoascus destructans
GMDG_01124
I
0.798
MYCTH_2313746
Myceliophthora thermophila
MYCTH_2313746
I
0.798
NEUTE1DRAFT_119006
Neurospora tetrasperma
NEUTE1DRAFT_119006
I
0.798
PODANS_1_13780
Podospora anserina
PODANS_1_13780
I
0.798
SMAC_04302
Sordaria macrospora
SMAC_04302
I
0.798
TRIREDRAFT_120597
Trichoderma reesei
TRIREDRAFT_120597
I
0.798
TRIVIDRAFT_40853
Trichoderma virens
TRIVIDRAFT_40853
I
0.798
V499_06270
Pseudogymnoascus pannorum
V499_06270
I
0.798
estExt_fgenesh3_kg.C_20464
Neurospora discreta
estExt_fgenesh3_kg.C_20464
I
0.798
csp-1
Neurospora crassa
NCU02713
D
0.798
CHGG_02761
Chaetomium globosum
CHGG_02761
I
0.793
BGHDH14_bgh03994
Blumeria graminis
BGHDH14_bgh03994
I
0.767
F503_06973
Ophiostoma piceae uamh
F503_06973
I
0.767
MBM_05919
Marssonina brunnea
MBM_05919
I
0.767
EV44_g6332
Erysiphe necator
EV44_g6332
I
0.762
HMPREF1624_02510
Sporothrix schenckii
HMPREF1624_02510
I
0.762
SPBR_03157
Sporothrix brasiliensis
SPBR_03157
I
0.762
estExt_fgenesh1_pm.C_40332
Cryphonectria parasitica
estExt_fgenesh1_pm.C_40332
I
0.762
Bcin11g01720
Botrytis cinerea
Bcin11g01720
I
0.758
THITE_2113093
Thielavia terrestris
THITE_2113093
I
0.757